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SLC38A3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC38A3
chr3:50,105,270..50,321,485, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr3_50206238_T_A | chr3:50206238 | 1.000 | 1.000 | 0.537 | — |
| chr3_50206165_C_A | chr3:50206165 | -0.949 | -0.826 | -0.708 | — |
| chr3_50206161_T_A | chr3:50206161 | -0.887 | -0.782 | -0.489 | — |
| chr3_50206225_G_T | chr3:50206225 | 0.887 | 0.730 | 0.818 | — |
| chr3_50206160_G_C | chr3:50206160 | -0.870 | -0.862 | -0.586 | — |
| chr3_50206165_C_G | chr3:50206165 | -0.863 | -0.769 | -0.696 | — |
| chr3_50206160_G_T | chr3:50206160 | -0.824 | -0.797 | -0.476 | — |
| chr3_50210535_C_G | chr3:50210535 | 0.809 | 1.000 | 0.684 | — |
| chr3_50206161_T_G | chr3:50206161 | -0.790 | -0.673 | -0.318 | — |
| chr3_50206163_T_A | chr3:50206163 | -0.774 | -0.642 | -0.501 | — |
| chr3_50206239_G_A | chr3:50206239 | 0.771 | 0.909 | 0.366 | — |
| chr3_50206163_T_C | chr3:50206163 | -0.752 | -0.595 | -0.391 | — |
| chr3_50206188_G_T | chr3:50206188 | -0.716 | -0.842 | -0.574 | — |
| chr3_50206208_G_C | chr3:50206208 | -0.716 | -0.753 | -0.708 | — |
| chr3_50206159_T_A | chr3:50206159 | -0.715 | -0.652 | -0.623 | — |
| chr3_50206159_T_G | chr3:50206159 | -0.708 | -0.655 | -0.611 | — |
| chr3_50206159_T_C | chr3:50206159 | -0.691 | -0.618 | -0.537 | — |
| chr3_50206161_T_C | chr3:50206161 | -0.682 | -0.626 | -0.427 | — |
| chr3_50206164_A_T | chr3:50206164 | -0.672 | -0.561 | -0.611 | — |
| chr3_50206194_A_T | chr3:50206194 | -0.662 | -0.621 | -0.489 | — |
| chr3_50206164_A_C | chr3:50206164 | -0.651 | -0.501 | -0.501 | — |
| chr3_50206190_A_G | chr3:50206190 | -0.648 | -0.600 | -0.928 | — |
| chr3_50206177_G_C | chr3:50206177 | 0.631 | 0.509 | 0.721 | — |
| chr3_50206188_G_A | chr3:50206188 | -0.621 | -0.629 | -0.501 | — |
| chr3_50210560_C_A | chr3:50210560 | -0.615 | -1.000 | -0.574 | — |
| chr3_50206165_C_T | chr3:50206165 | -0.597 | -0.631 | -0.501 | — |
| chr3_50206181_G_T | chr3:50206181 | -0.586 | -0.701 | -0.476 | — |
| chr3_50206208_G_T | chr3:50206208 | -0.581 | -0.675 | -0.501 | — |
| chr3_50206188_G_C | chr3:50206188 | -0.569 | -0.597 | -0.391 | — |
| chr3_50210545_T_A | chr3:50210545 | 0.569 | 0.956 | 0.647 | <0.001% |
| chr3_50206168_C_A | chr3:50206168 | 0.564 | 0.429 | 0.342 | — |
| chr3_50210535_C_T | chr3:50210535 | 0.559 | 0.919 | 0.501 | — |
| chr3_50206238_T_G | chr3:50206238 | 0.544 | 0.771 | 0.366 | — |
| chr3_50206162_T_C | chr3:50206162 | -0.542 | -0.418 | -0.342 | — |
| chr3_50210574_C_G | chr3:50210574 | -0.532 | -0.558 | -0.586 | — |
| chr3_50206199_C_G | chr3:50206199 | -0.528 | -0.488 | -0.562 | — |
| chr3_50206189_G_T | chr3:50206189 | -0.516 | -0.522 | -0.403 | — |
| chr3_50206187_G_T | chr3:50206187 | -0.515 | -0.488 | -0.440 | — |
| chr3_50210563_T_A | chr3:50210563 | -0.513 | -1.000 | -0.733 | — |
| chr3_50210567_C_G | chr3:50210567 | -0.509 | -1.000 | -0.623 | — |
| chr3_50206164_A_G | chr3:50206164 | -0.506 | -0.353 | -0.501 | — |
| chr3_50206208_G_A | chr3:50206208 | -0.506 | -0.605 | -0.427 | — |
| chr3_50210563_T_G | chr3:50210563 | -0.506 | -1.000 | -0.684 | — |
| chr3_50206210_C_A | chr3:50206210 | -0.499 | -0.590 | -0.415 | — |
| chr3_50206189_G_A | chr3:50206189 | -0.487 | -0.488 | -0.391 | — |
| chr3_50206192_G_A | chr3:50206192 | -0.485 | -0.532 | -0.476 | — |
| chr3_50210567_C_T | chr3:50210567 | -0.485 | -0.969 | -0.647 | — |
| chr3_50206162_T_A | chr3:50206162 | -0.482 | -0.442 | -0.440 | — |
| chr3_50206156_G_C | chr3:50206156 | -0.480 | -0.465 | -0.366 | — |
| chr3_50206140_C_G | chr3:50206140 | -0.477 | -0.519 | -0.440 | — |
| chr3_50210559_A_C | chr3:50210559 | -0.472 | -0.883 | -0.501 | — |
| chr3_50210539_G_A | chr3:50210539 | 0.470 | 0.831 | 0.501 | — |
| chr3_50210547_G_T | chr3:50210547 | 0.462 | 0.766 | 0.586 | — |
| chr3_50206211_C_G | chr3:50206211 | -0.460 | -0.501 | -0.427 | — |
| chr3_50206197_T_C | chr3:50206197 | -0.451 | -0.421 | -0.293 | — |
| chr3_50210582_T_C | chr3:50210582 | 0.451 | 0.517 | 0.440 | — |
| chr3_50206141_A_C | chr3:50206141 | -0.448 | -0.390 | -0.489 | — |
| chr3_50206225_G_C | chr3:50206225 | 0.444 | 0.312 | 0.366 | — |
| chr3_50210559_A_G | chr3:50210559 | -0.444 | -0.888 | -0.525 | — |
| chr3_50206210_C_G | chr3:50206210 | -0.438 | -0.553 | -0.415 | — |
| chr3_50210587_T_A | chr3:50210587 | -0.156 | -0.688 | -0.782 | — |
| chr3_50206169_C_G | chr3:50206169 | -0.434 | -0.483 | -0.318 | — |
| chr3_50206148_A_G | chr3:50206148 | 0.431 | 0.384 | 0.220 | — |
| chr3_50210567_C_A | chr3:50210567 | -0.429 | -0.932 | -0.708 | — |
| chr3_50206187_G_C | chr3:50206187 | -0.426 | -0.382 | -0.318 | — |
| chr3_50206140_C_A | chr3:50206140 | -0.422 | -0.455 | -0.452 | — |
| chr3_50206218_C_G | chr3:50206218 | 0.421 | 0.597 | 0.623 | — |
| chr3_50206160_G_A | chr3:50206160 | -0.417 | -0.403 | -0.232 | — |
| chr3_50206218_C_T | chr3:50206218 | 0.412 | 0.387 | 0.415 | <0.001% |
| chr3_50210560_C_T | chr3:50210560 | -0.410 | -1.000 | -0.647 | — |
| chr3_50206162_T_G | chr3:50206162 | -0.407 | -0.260 | -0.366 | — |
| chr3_50210560_C_G | chr3:50210560 | -0.407 | -1.000 | -0.537 | — |
| chr3_50206178_G_C | chr3:50206178 | 0.405 | 0.177 | 0.684 | — |
| chr3_50206193_G_C | chr3:50206193 | -0.403 | -0.517 | -0.415 | — |
| chr3_50210571_G_C | chr3:50210571 | -0.402 | -0.532 | -0.293 | — |
| chr3_50206157_T_A | chr3:50206157 | -0.400 | -0.423 | -0.195 | — |
| chr3_50206254_C_G | chr3:50206254 | -0.398 | -0.403 | -0.330 | — |
| chr3_50206218_C_A | chr3:50206218 | 0.393 | 0.330 | 0.427 | — |
| chr3_50206223_C_G | chr3:50206223 | -0.393 | -0.325 | -0.318 | — |
| chr3_50206223_C_A | chr3:50206223 | -0.391 | -0.353 | -0.391 | — |
| chr3_50206144_G_T | chr3:50206144 | -0.390 | -0.236 | -0.525 | — |
| chr3_50206210_C_T | chr3:50206210 | -0.390 | -0.499 | -0.427 | — |
| chr3_50206169_C_A | chr3:50206169 | -0.385 | -0.455 | -0.318 | — |
| chr3_50206219_C_T | chr3:50206219 | 0.385 | 0.247 | 0.354 | — |
| chr3_50210563_T_C | chr3:50210563 | -0.381 | -0.844 | -0.537 | — |
| chr3_50210564_G_C | chr3:50210564 | -0.381 | -0.990 | -0.586 | — |
| chr3_50206192_G_C | chr3:50206192 | -0.379 | -0.397 | -0.293 | — |
| chr3_50210564_G_A | chr3:50210564 | -0.379 | -0.945 | -0.464 | — |
| chr3_50206211_C_A | chr3:50206211 | -0.378 | -0.548 | -0.489 | — |
| chr3_50210544_C_T | chr3:50210544 | -0.378 | -0.732 | -0.476 | — |
| chr3_50206228_A_T | chr3:50206228 | -0.374 | -0.325 | -0.183 | — |
| chr3_50206209_C_T | chr3:50206209 | -0.373 | -0.377 | -0.305 | — |
| chr3_50206169_C_T | chr3:50206169 | -0.369 | -0.384 | -0.305 | — |
| chr3_50206148_A_T | chr3:50206148 | 0.368 | 0.390 | 0.403 | — |
| chr3_50210561_C_T | chr3:50210561 | 0.368 | 0.704 | 0.611 | — |
| chr3_50206217_C_A | chr3:50206217 | 0.366 | 0.403 | 0.159 | 0.0033% |
| chr3_50210550_A_T | chr3:50210550 | -0.291 | -0.644 | -0.647 | — |
| chr3_50206167_C_T | chr3:50206167 | -0.361 | -0.291 | -0.220 | — |
| chr3_50206219_C_G | chr3:50206219 | 0.361 | 0.200 | 0.489 | 0.0026% |
| chr3_50206191_G_A | chr3:50206191 | -0.359 | -0.322 | -0.379 | — |
| chr3_50206191_G_T | chr3:50206191 | -0.354 | -0.400 | -0.366 | — |
| chr3_50206201_G_T | chr3:50206201 | 0.352 | 0.314 | 0.244 | — |
| chr3_50206145_C_A | chr3:50206145 | -0.350 | -0.286 | -0.391 | — |
| chr3_50210587_T_G | chr3:50210587 | 0.349 | -0.091 | -0.122 | — |
| chr3_50210559_A_T | chr3:50210559 | -0.345 | -0.706 | -0.513 | — |
| chr3_50210569_C_G | chr3:50210569 | -0.345 | -0.509 | -0.269 | 0.0066% |
| chr3_50206179_G_C | chr3:50206179 | 0.344 | 0.306 | 0.342 | — |
| chr3_50206209_C_G | chr3:50206209 | -0.344 | -0.405 | -0.281 | — |
| chr3_50176645_A_G | chr3:50176645 | -0.079 | -0.143 | -0.605 | — |
| chr3_50210547_G_C | chr3:50210547 | 0.338 | 0.481 | 0.379 | — |
| chr3_50206176_G_C | chr3:50206176 | 0.335 | 0.273 | 0.550 | — |
| chr3_50210568_C_G | chr3:50210568 | -0.330 | -0.681 | -0.415 | — |
| chr3_50210574_C_A | chr3:50210574 | -0.328 | -0.616 | -0.476 | — |
| chr3_50206175_G_C | chr3:50206175 | 0.325 | 0.195 | 0.452 | <0.001% |
| chr3_50210558_G_C | chr3:50210558 | -0.325 | -0.751 | -0.305 | — |
| chr3_50210571_G_A | chr3:50210571 | -0.325 | -0.449 | -0.256 | — |
| chr3_50210569_C_T | chr3:50210569 | -0.321 | -0.556 | -0.415 | — |
| chr3_50206166_A_C | chr3:50206166 | -0.320 | -0.338 | -0.305 | — |
| chr3_50206237_C_A | chr3:50206237 | 0.320 | 0.608 | 0.525 | — |
| chr3_50206150_G_A | chr3:50206150 | 0.318 | 0.413 | 0.183 | — |
| chr3_50206217_C_G | chr3:50206217 | 0.308 | 0.294 | 0.293 | — |
| chr3_50206156_G_T | chr3:50206156 | -0.297 | -0.288 | -0.232 | — |
| chr3_50206186_G_C | chr3:50206186 | -0.296 | -0.281 | -0.208 | — |
| chr3_50210556_A_T | chr3:50210556 | 0.296 | 0.530 | 0.452 | — |
| chr3_50206177_G_T | chr3:50206177 | 0.291 | 0.156 | 0.110 | — |
| chr3_50206181_G_C | chr3:50206181 | -0.289 | -0.312 | -0.110 | — |
| chr3_50210562_T_G | chr3:50210562 | -0.287 | -0.706 | -0.183 | — |
| chr3_50206145_C_G | chr3:50206145 | -0.282 | 0.073 | -0.049 | <0.001% |
| chr3_50206216_C_G | chr3:50206216 | 0.282 | 0.491 | 0.256 | — |
| chr3_50206196_C_G | chr3:50206196 | -0.280 | -0.226 | -0.147 | — |
| chr3_50206212_T_G | chr3:50206212 | -0.280 | -0.291 | -0.110 | — |
| chr3_50210566_T_C | chr3:50210566 | 0.280 | 0.652 | 0.293 | — |
| chr3_50206183_C_A | chr3:50206183 | 0.279 | 0.229 | 0.195 | — |
| chr3_50206217_C_T | chr3:50206217 | 0.279 | 0.158 | 0.183 | — |
| chr3_50206231_T_A | chr3:50206231 | 0.279 | 0.309 | 0.110 | — |
| chr3_50210562_T_A | chr3:50210562 | -0.279 | -0.714 | -0.256 | — |
| chr3_50206177_G_A | chr3:50206177 | 0.277 | 0.184 | 0.305 | — |
| chr3_50210575_A_T | chr3:50210575 | -0.277 | -0.361 | -0.220 | — |
| chr3_50210576_G_A | chr3:50210576 | 0.277 | 0.244 | 0.122 | — |
| chr3_50206191_G_C | chr3:50206191 | -0.275 | -0.236 | -0.244 | — |
| chr3_50206223_C_T | chr3:50206223 | -0.275 | -0.260 | -0.269 | — |
| chr3_50210548_G_C | chr3:50210548 | 0.246 | 0.351 | 0.489 | — |
| chr3_50206176_G_A | chr3:50206176 | 0.272 | 0.268 | 0.293 | — |
| chr3_50210581_C_A | chr3:50210581 | -0.272 | -0.481 | -0.452 | — |
| chr3_50206178_G_T | chr3:50206178 | 0.270 | 0.182 | 0.293 | — |
| chr3_50206156_G_A | chr3:50206156 | -0.268 | -0.252 | -0.220 | — |
| chr3_50210562_T_C | chr3:50210562 | -0.268 | -0.688 | -0.379 | — |
| chr3_50206158_T_C | chr3:50206158 | -0.267 | -0.255 | -0.220 | — |
| chr3_50206216_C_A | chr3:50206216 | 0.267 | 0.343 | 0.159 | 0.0039% |
| chr3_50210537_C_A | chr3:50210537 | -0.267 | -0.525 | -0.305 | — |
| chr3_50210568_C_A | chr3:50210568 | -0.267 | -0.569 | -0.440 | — |
| chr3_50210564_G_T | chr3:50210564 | -0.265 | -0.701 | -0.427 | — |
| chr3_50206158_T_G | chr3:50206158 | -0.263 | -0.197 | -0.208 | — |
| chr3_50210565_A_T | chr3:50210565 | -0.262 | -0.668 | -0.318 | — |
| chr3_50176647_T_G | chr3:50176647 | -0.058 | -0.127 | -0.464 | 0.0013% |
| chr3_50210552_T_C | chr3:50210552 | -0.191 | -0.408 | -0.464 | — |
| chr3_50206214_T_A | chr3:50206214 | -0.258 | -0.317 | -0.159 | — |
| chr3_50206187_G_A | chr3:50206187 | -0.256 | -0.218 | -0.208 | 0.0020% |
| chr3_50206190_A_T | chr3:50206190 | -0.256 | -0.247 | -0.256 | — |
| chr3_50210569_C_A | chr3:50210569 | -0.255 | -0.634 | -0.440 | — |
| chr3_50210575_A_C | chr3:50210575 | -0.255 | -0.390 | -0.208 | — |
| chr3_50206167_C_A | chr3:50206167 | -0.250 | -0.306 | -0.183 | <0.001% |
| chr3_50206240_A_G | chr3:50206240 | -0.246 | -0.234 | -0.134 | — |
| chr3_50210550_A_G | chr3:50210550 | -0.210 | -0.444 | -0.440 | — |
| chr3_50206195_C_A | chr3:50206195 | -0.244 | -0.203 | -0.208 | — |
| chr3_50206196_C_A | chr3:50206196 | -0.243 | -0.244 | -0.195 | — |
| chr3_50206197_T_G | chr3:50206197 | -0.241 | -0.205 | -0.147 | — |
| chr3_50206237_C_T | chr3:50206237 | -0.241 | -0.356 | -0.330 | — |
| chr3_50210565_A_G | chr3:50210565 | -0.241 | -0.571 | -0.318 | <0.001% |
| chr3_50176653_G_C | chr3:50176653 | 0.036 | 0.092 | 0.427 | — |
| chr3_50206252_G_T | chr3:50206252 | 0.239 | 0.273 | 0.098 | — |
| chr3_50210548_G_T | chr3:50210548 | 0.226 | 0.442 | 0.427 | — |
| chr3_50206139_C_G | chr3:50206139 | -0.236 | -0.216 | -0.293 | — |
| chr3_50206141_A_T | chr3:50206141 | -0.236 | -0.143 | -0.305 | — |
| chr3_50206172_G_A | chr3:50206172 | -0.236 | -0.244 | -0.183 | — |
| chr3_50206246_G_T | chr3:50206246 | 0.236 | 0.052 | -0.305 | — |
| chr3_50206148_A_C | chr3:50206148 | 0.234 | 0.117 | 0.147 | — |
| chr3_50206228_A_G | chr3:50206228 | -0.234 | -0.164 | -0.085 | — |
| chr3_50210531_A_C | chr3:50210531 | 0.234 | 0.312 | 0.281 | — |
| chr3_50206163_T_G | chr3:50206163 | -0.231 | -0.023 | 0.012 | — |
| chr3_50176654_G_C | chr3:50176654 | 0.041 | 0.084 | 0.409 | — |
| chr3_50206214_T_G | chr3:50206214 | -0.229 | -0.260 | -0.073 | — |
| chr3_50210566_T_G | chr3:50210566 | -0.229 | -0.444 | -0.269 | — |
| chr3_50206144_G_A | chr3:50206144 | -0.227 | -0.273 | -0.281 | <0.001% |
| chr3_50206149_T_C | chr3:50206149 | 0.227 | 0.140 | 0.232 | <0.001% |
| chr3_50206185_A_T | chr3:50206185 | -0.227 | -0.226 | -0.195 | — |
| chr3_50206215_T_A | chr3:50206215 | 0.227 | 0.332 | 0.232 | — |
| chr3_50206189_G_C | chr3:50206189 | -0.226 | -0.195 | -0.134 | — |
| chr3_50206155_C_T | chr3:50206155 | 0.222 | 0.239 | 0.134 | — |
| chr3_50210541_G_C | chr3:50210541 | -0.222 | -0.322 | -0.134 | — |
| chr3_50206170_A_G | chr3:50206170 | -0.221 | -0.234 | -0.171 | — |
| chr3_50206219_C_A | chr3:50206219 | 0.221 | 0.088 | 0.220 | — |
| chr3_50210570_T_C | chr3:50210570 | -0.221 | -0.327 | -0.232 | — |
| chr3_50210585_G_A | chr3:50210585 | -0.221 | 0.153 | 0.281 | — |
| chr3_50176653_G_T | chr3:50176653 | 0.046 | 0.100 | 0.391 | — |
| chr3_50210588_T_A | chr3:50210588 | 0.152 | -0.379 | -0.391 | — |
| chr3_50206168_C_G | chr3:50206168 | 0.217 | 0.179 | 0.232 | — |
| chr3_50210537_C_G | chr3:50210537 | -0.217 | -0.358 | -0.195 | — |
| chr3_50206179_G_A | chr3:50206179 | 0.215 | 0.205 | 0.122 | — |
| chr3_50206193_G_T | chr3:50206193 | -0.214 | -0.317 | -0.134 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.