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SLC6A19
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC6A19
chr5:1,101,594..1,325,111, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1106106_C_G | chr5:1106106 | -1.000 | -1.000 | -1.000 | 0.0046% |
| chr5_1119537_C_T | chr5:1119537 | 1.000 | 1.000 | 1.000 | 0.0053% |
| chr5_1119638_G_C | chr5:1119638 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1107417_A_T | chr5:1107417 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1106106_C_T | chr5:1106106 | -1.000 | -1.000 | -0.967 | 0.056% |
| chr5_1106102_T_C | chr5:1106102 | -1.000 | -1.000 | -0.784 | 3.82% |
| chr5_1107409_C_T | chr5:1107409 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1107291_C_T | chr5:1107291 | 1.000 | 0.946 | 0.431 | 0.0013% |
| chr5_1119567_G_A | chr5:1119567 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr5_1119545_C_T | chr5:1119545 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr5_1107406_G_A | chr5:1107406 | -1.000 | -1.000 | -1.000 | 0.012% |
| chr5_1119513_T_C | chr5:1119513 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1105594_T_A | chr5:1105594 | 1.000 | 0.875 | 0.771 | <0.001% |
| chr5_1119631_G_C | chr5:1119631 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr5_1107328_C_G | chr5:1107328 | -1.000 | -1.000 | -0.771 | <0.001% |
| chr5_1105646_C_A | chr5:1105646 | 1.000 | 1.000 | 0.863 | <0.001% |
| chr5_1103796_G_A | chr5:1103796 | -1.000 | -0.604 | -1.000 | <0.001% |
| chr5_1119516_C_A | chr5:1119516 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1119631_G_A | chr5:1119631 | -1.000 | -1.000 | -1.000 | 0.0039% |
| chr5_1103798_C_T | chr5:1103798 | -1.000 | -0.792 | -1.000 | <0.001% |
| chr5_1103851_G_T | chr5:1103851 | -1.000 | -0.665 | -1.000 | <0.001% |
| chr5_1105656_G_T | chr5:1105656 | -1.000 | -0.214 | -0.444 | <0.001% |
| chr5_1106182_G_C | chr5:1106182 | 1.000 | 0.933 | 0.523 | <0.001% |
| chr5_1105625_T_G | chr5:1105625 | -1.000 | 0.358 | -0.824 | <0.001% |
| chr5_1119481_T_C | chr5:1119481 | -1.000 | -1.000 | -1.000 | 4.73% |
| chr5_1118902_A_G | chr5:1118902 | 0.726 | 0.556 | 1.000 | 0.0079% |
| chr5_1118938_G_T | chr5:1118938 | -0.736 | -0.719 | -1.000 | 0.0013% |
| chr5_1107389_G_A | chr5:1107389 | -0.984 | -1.000 | -0.680 | 0.0013% |
| chr5_1105655_G_A | chr5:1105655 | -0.965 | -0.345 | -0.392 | <0.001% |
| chr5_1118892_C_T | chr5:1118892 | -0.727 | -0.681 | -1.000 | 0.0013% |
| chr5_1103796_G_T | chr5:1103796 | -0.915 | -0.623 | -0.706 | <0.001% |
| chr5_1119507_G_A | chr5:1119507 | -0.903 | -1.000 | -1.000 | 0.019% |
| chr5_1105660_T_C | chr5:1105660 | -0.895 | -0.831 | -0.444 | 0.013% |
| chr5_1107901_C_G | chr5:1107901 | 0.882 | 0.636 | 0.588 | <0.001% |
| chr5_1106155_A_G | chr5:1106155 | 0.872 | 0.620 | 0.536 | <0.001% |
| chr5_1119589_T_C | chr5:1119589 | -0.860 | -1.000 | -0.941 | <0.001% |
| chr5_1106083_C_T | chr5:1106083 | -0.841 | -0.786 | -0.301 | 0.0033% |
| chr5_1107328_C_A | chr5:1107328 | -0.821 | -0.952 | -0.444 | <0.001% |
| chr5_1119466_G_C | chr5:1119466 | -0.821 | -1.000 | -1.000 | 0.0013% |
| chr5_1119610_T_C | chr5:1119610 | -0.816 | -1.000 | -1.000 | 0.0013% |
| chr5_1107826_A_G | chr5:1107826 | -0.800 | -1.000 | -0.549 | <0.001% |
| chr5_1106156_G_C | chr5:1106156 | 0.792 | 0.639 | 0.444 | <0.001% |
| chr5_1103824_G_A | chr5:1103824 | -0.788 | -0.444 | -0.837 | <0.001% |
| chr5_1103826_A_T | chr5:1103826 | -0.784 | -0.770 | -0.392 | <0.001% |
| chr5_1106048_G_A | chr5:1106048 | -0.775 | -0.741 | -0.562 | 0.0013% |
| chr5_1119599_G_A | chr5:1119599 | 0.757 | 0.204 | 0.209 | <0.001% |
| chr5_1103795_C_T | chr5:1103795 | -0.746 | -0.393 | -0.693 | 0.0013% |
| chr5_1119460_G_A | chr5:1119460 | 0.746 | 0.879 | 0.641 | 0.0072% |
| chr5_1111382_G_A | chr5:1111382 | 0.740 | 0.594 | 1.000 | 0.332% |
| chr5_1103797_C_T | chr5:1103797 | -0.738 | -0.550 | -0.614 | 0.0013% |
| chr5_1111383_G_T | chr5:1111383 | 0.728 | 0.805 | 1.000 | <0.001% |
| chr5_1105627_T_C | chr5:1105627 | -0.726 | 0.291 | -0.471 | 0.0046% |
| chr5_1111338_C_T | chr5:1111338 | 0.726 | 0.169 | 0.889 | 0.290% |
| chr5_1105644_T_C | chr5:1105644 | 0.713 | 0.128 | 0.745 | <0.001% |
| chr5_1107824_A_T | chr5:1107824 | -0.713 | -1.000 | -0.458 | <0.001% |
| chr5_1105623_T_C | chr5:1105623 | -0.705 | 0.786 | -0.497 | 0.0013% |
| chr5_1119425_C_T | chr5:1119425 | -0.695 | -0.968 | -0.928 | 0.0026% |
| chr5_1106030_C_T | chr5:1106030 | -0.682 | -0.594 | -0.327 | <0.001% |
| chr5_1107484_C_T | chr5:1107484 | 0.676 | 0.716 | 0.379 | <0.001% |
| chr5_1107902_T_A | chr5:1107902 | 0.672 | 0.466 | 0.484 | 0.531% |
| chr5_1107825_A_G | chr5:1107825 | -0.660 | -0.971 | -0.444 | 0.0013% |
| chr5_1111406_G_C | chr5:1111406 | 0.384 | 0.538 | 1.000 | <0.001% |
| chr5_1119514_G_T | chr5:1119514 | -0.658 | -0.875 | -0.693 | <0.001% |
| chr5_1106059_C_T | chr5:1106059 | -0.656 | -0.665 | -0.196 | 0.0020% |
| chr5_1119479_T_G | chr5:1119479 | -0.641 | -0.885 | -0.863 | 0.0026% |
| chr5_1107402_C_T | chr5:1107402 | 0.631 | 0.581 | 0.418 | 0.0059% |
| chr5_1103706_G_A | chr5:1103706 | 0.623 | 0.345 | 0.222 | 0.0013% |
| chr5_1105694_C_G | chr5:1105694 | -0.619 | -0.339 | -0.261 | 0.0092% |
| chr5_1111721_T_G | chr5:1111721 | -0.111 | -0.211 | -0.980 | 0.0013% |
| chr5_1106141_C_T | chr5:1106141 | -0.614 | -0.450 | -0.301 | <0.001% |
| chr5_1107586_C_T | chr5:1107586 | 0.614 | 0.696 | 0.222 | 0.0033% |
| chr5_1107825_A_C | chr5:1107825 | -0.614 | -0.952 | -0.379 | <0.001% |
| chr5_1119696_C_T | chr5:1119696 | -0.612 | -0.850 | -0.758 | 0.0020% |
| chr5_1119673_C_A | chr5:1119673 | 0.606 | 0.812 | 0.797 | <0.001% |
| chr5_1119604_G_A | chr5:1119604 | -0.604 | -0.799 | -0.641 | 0.0033% |
| chr5_1107307_T_C | chr5:1107307 | -0.602 | 0.134 | -0.026 | 0.0013% |
| chr5_1111380_G_C | chr5:1111380 | 0.602 | 0.562 | 0.850 | 0.0020% |
| chr5_1111384_G_T | chr5:1111384 | 0.503 | 0.431 | 0.954 | <0.001% |
| chr5_1119608_G_A | chr5:1119608 | -0.573 | -0.684 | -0.680 | 0.0059% |
| chr5_1111867_C_T | chr5:1111867 | -0.216 | 0.117 | 0.889 | <0.001% |
| chr5_1111339_C_T | chr5:1111339 | 0.548 | 0.121 | 0.784 | <0.001% |
| chr5_1118930_C_T | chr5:1118930 | 0.528 | 0.553 | 0.863 | 0.0013% |
| chr5_1107298_G_A | chr5:1107298 | 0.532 | 0.173 | 0.052 | <0.001% |
| chr5_1119580_G_A | chr5:1119580 | -0.532 | -0.709 | -0.641 | 0.0033% |
| chr5_1106143_A_G | chr5:1106143 | 0.528 | 0.530 | 0.261 | 0.0033% |
| chr5_1111379_G_A | chr5:1111379 | 0.526 | 0.489 | 0.327 | 0.0013% |
| chr5_1105974_A_C | chr5:1105974 | -0.346 | -0.319 | -0.824 | 0.0039% |
| chr5_1107340_C_A | chr5:1107340 | -0.520 | -0.652 | -0.418 | 0.0059% |
| chr5_1107360_G_A | chr5:1107360 | 0.520 | 0.473 | 0.301 | 0.0013% |
| chr5_1119498_G_T | chr5:1119498 | -0.511 | -0.645 | -0.667 | <0.001% |
| chr5_1105993_A_C | chr5:1105993 | -0.507 | -0.243 | -0.523 | 0.0013% |
| chr5_1119545_C_G | chr5:1119545 | 0.505 | 0.550 | 0.510 | 0.0026% |
| chr5_1103813_T_C | chr5:1103813 | -0.503 | -0.470 | -0.327 | <0.001% |
| chr5_1119593_C_T | chr5:1119593 | -0.491 | -0.585 | -0.484 | 0.079% |
| chr5_1103902_C_T | chr5:1103902 | -0.487 | -0.377 | -0.601 | <0.001% |
| chr5_1119445_C_G | chr5:1119445 | 0.485 | 0.681 | 0.497 | <0.001% |
| chr5_1103857_G_C | chr5:1103857 | -0.482 | -0.390 | -0.366 | <0.001% |
| chr5_1112056_A_G | chr5:1112056 | -0.091 | -0.126 | -0.762 | <0.001% |
| chr5_1106138_G_A | chr5:1106138 | -0.480 | -0.463 | -0.196 | 0.177% |
| chr5_1103822_G_A | chr5:1103822 | -0.474 | -0.435 | -0.536 | <0.001% |
| chr5_1107420_G_A | chr5:1107420 | -0.474 | -0.556 | -0.248 | 0.0020% |
| chr5_1111821_C_A | chr5:1111821 | 0.076 | 0.142 | 0.745 | 0.023% |
| chr5_1119657_A_C | chr5:1119657 | 0.466 | 0.748 | 0.431 | 0.0013% |
| chr5_1111386_G_A | chr5:1111386 | 0.278 | 0.310 | 0.732 | 0.0013% |
| chr5_1119679_G_A | chr5:1119679 | -0.452 | -0.489 | -0.706 | 0.0046% |
| chr5_1119572_G_C | chr5:1119572 | 0.449 | 0.463 | 0.379 | 0.0026% |
| chr5_1112112_A_T | chr5:1112112 | -0.061 | -0.036 | -0.705 | 0.0033% |
| chr5_1112020_C_A | chr5:1112020 | 0.165 | 0.137 | 0.703 | <0.001% |
| chr5_1118876_C_T | chr5:1118876 | -0.443 | -0.367 | -0.575 | <0.001% |
| chr5_1103749_G_A | chr5:1103749 | -0.441 | -0.348 | -0.340 | <0.001% |
| chr5_1111346_C_T | chr5:1111346 | 0.439 | 0.288 | 0.510 | <0.001% |
| chr5_1119453_G_A | chr5:1119453 | -0.439 | -0.486 | -0.353 | 0.0053% |
| chr5_1107801_C_A | chr5:1107801 | 0.437 | 0.457 | 0.209 | 0.011% |
| chr5_1111826_G_T | chr5:1111826 | 0.066 | 0.142 | 0.693 | <0.001% |
| chr5_1118914_G_C | chr5:1118914 | -0.179 | -0.294 | -0.680 | <0.001% |
| chr5_1105637_A_C | chr5:1105637 | 0.194 | 1.000 | -0.092 | <0.001% |
| chr5_1107837_T_C | chr5:1107837 | 0.421 | 0.636 | 0.340 | <0.001% |
| chr5_1107898_C_A | chr5:1107898 | -0.421 | -0.447 | -0.353 | <0.001% |
| chr5_1111879_C_T | chr5:1111879 | 0.043 | 0.123 | 0.667 | <0.001% |
| chr5_1103714_C_T | chr5:1103714 | 0.416 | 0.208 | 0.118 | <0.001% |
| chr5_1119429_G_A | chr5:1119429 | -0.410 | -0.527 | -0.484 | 0.0026% |
| chr5_1103837_G_A | chr5:1103837 | -0.404 | -0.486 | -0.288 | 0.0026% |
| chr5_1111996_G_A | chr5:1111996 | 0.182 | 0.291 | 0.634 | <0.001% |
| chr5_1111746_G_A | chr5:1111746 | 0.043 | 0.099 | 0.627 | 0.0085% |
| chr5_1111839_T_G | chr5:1111839 | -0.181 | -0.209 | -0.627 | <0.001% |
| chr5_1105621_T_C | chr5:1105621 | 0.392 | -0.550 | 0.013 | 0.0013% |
| chr5_1106009_T_C | chr5:1106009 | -0.392 | -0.364 | -0.222 | <0.001% |
| chr5_1111412_G_A | chr5:1111412 | 0.066 | 0.088 | 0.614 | 0.0026% |
| chr5_1103738_C_T | chr5:1103738 | -0.379 | -0.236 | -0.275 | 4.81% |
| chr5_1111410_G_C | chr5:1111410 | 0.091 | 0.104 | 0.601 | 0.0013% |
| chr5_1111413_G_A | chr5:1111413 | 0.243 | 0.308 | 0.601 | <0.001% |
| chr5_1111854_G_A | chr5:1111854 | 0.010 | 0.123 | 0.601 | <0.001% |
| chr5_1111872_G_A | chr5:1111872 | 0.049 | 0.152 | 0.601 | <0.001% |
| chr5_1112031_G_A | chr5:1112031 | 0.063 | 0.126 | 0.601 | 0.0013% |
| chr5_1112124_C_G | chr5:1112124 | -0.043 | -0.136 | 0.598 | 0.0026% |
| chr5_1112023_C_A | chr5:1112023 | 0.142 | 0.293 | 0.598 | 0.013% |
| chr5_1105986_C_T | chr5:1105986 | 0.375 | 0.300 | 0.157 | <0.001% |
| chr5_1112030_C_T | chr5:1112030 | 0.111 | 0.139 | 0.592 | <0.001% |
| chr5_1112075_G_C | chr5:1112075 | -0.373 | 0.224 | -0.587 | <0.001% |
| chr5_1112090_G_C | chr5:1112090 | -0.175 | -0.083 | -0.589 | <0.001% |
| chr5_1105693_C_G | chr5:1105693 | -0.371 | 0.118 | -0.065 | 0.051% |
| chr5_1105954_C_T | chr5:1105954 | -0.371 | -0.217 | -0.013 | <0.001% |
| chr5_1111381_G_A | chr5:1111381 | 0.252 | 0.364 | 0.588 | 0.0013% |
| chr5_1111379_G_C | chr5:1111379 | 0.367 | 0.438 | 0.418 | 0.0053% |
| chr5_1119452_C_T | chr5:1119452 | -0.367 | -0.419 | -0.327 | 0.161% |
| chr5_1105569_C_T | chr5:1105569 | -0.365 | 0.297 | -0.261 | <0.001% |
| chr5_1119569_T_C | chr5:1119569 | -0.365 | -0.486 | -0.379 | <0.001% |
| chr5_1106137_C_T | chr5:1106137 | 0.363 | 0.300 | 0.288 | 0.0013% |
| chr5_1111707_G_T | chr5:1111707 | 0.066 | 0.118 | 0.575 | 0.0039% |
| chr5_1111822_G_A | chr5:1111822 | -0.010 | 0.113 | 0.575 | 0.0026% |
| chr5_1119676_C_G | chr5:1119676 | 0.361 | 0.428 | 0.405 | <0.001% |
| chr5_1107346_C_G | chr5:1107346 | 0.359 | 0.620 | 0.327 | <0.001% |
| chr5_1119792_G_C | chr5:1119792 | -0.359 | -0.450 | -0.327 | <0.001% |
| chr5_1112026_G_A | chr5:1112026 | 0.144 | 0.128 | 0.564 | <0.001% |
| chr5_1107819_G_C | chr5:1107819 | -0.355 | -0.543 | -0.353 | 0.0020% |
| chr5_1111860_G_A | chr5:1111860 | 0.016 | 0.113 | 0.562 | 0.0013% |
| chr5_1112025_C_T | chr5:1112025 | 0.192 | 0.167 | 0.562 | 0.0020% |
| chr5_1118873_G_A | chr5:1118873 | -0.318 | -0.323 | -0.562 | <0.001% |
| chr5_1112023_C_T | chr5:1112023 | 0.099 | 0.285 | 0.559 | <0.001% |
| chr5_1103851_G_A | chr5:1103851 | -0.351 | -0.217 | -0.444 | 0.0039% |
| chr5_1111411_G_A | chr5:1111411 | 0.035 | -0.019 | 0.549 | 0.0026% |
| chr5_1118886_G_A | chr5:1118886 | 0.324 | 0.265 | 0.549 | 0.0020% |
| chr5_1119523_C_T | chr5:1119523 | -0.344 | -0.495 | -0.379 | 0.059% |
| chr5_1106008_G_A | chr5:1106008 | -0.338 | -0.383 | -0.078 | 0.0066% |
| chr5_1107402_C_G | chr5:1107402 | 0.338 | 0.141 | 0.340 | <0.001% |
| chr5_1111661_G_A | chr5:1111661 | -0.012 | 0.195 | 0.536 | 0.0072% |
| chr5_1111781_C_T | chr5:1111781 | 0.058 | 0.097 | 0.536 | <0.001% |
| chr5_1111831_G_T | chr5:1111831 | 0.080 | 0.141 | 0.536 | 0.0013% |
| chr5_1119459_C_T | chr5:1119459 | -0.315 | -0.505 | -0.536 | <0.001% |
| chr5_1112101_C_G | chr5:1112101 | -0.337 | 0.003 | -0.447 | <0.001% |
| chr5_1107865_G_C | chr5:1107865 | -0.334 | -0.412 | -0.222 | 0.0013% |
| chr5_1112141_C_A | chr5:1112141 | 0.240 | 0.089 | 0.526 | 0.0013% |
| chr5_1111884_G_A | chr5:1111884 | 0.058 | 0.110 | 0.523 | 0.119% |
| chr5_1118902_A_C | chr5:1118902 | 0.233 | 0.157 | 0.523 | 0.0053% |
| chr5_1118931_G_A | chr5:1118931 | -0.122 | -0.361 | -0.523 | <0.001% |
| chr5_1112037_C_T | chr5:1112037 | 0.090 | 0.236 | 0.521 | <0.001% |
| chr5_1106002_A_G | chr5:1106002 | 0.326 | 0.217 | 0.288 | <0.001% |
| chr5_1111542_G_A | chr5:1111542 | 0.326 | 0.259 | 0.105 | 37.7% |
| chr5_1119538_G_A | chr5:1119538 | 0.324 | 0.444 | 0.405 | 0.0013% |
| chr5_1107756_C_T | chr5:1107756 | -0.322 | -0.288 | -0.275 | <0.001% |
| chr5_1111706_G_C | chr5:1111706 | 0.076 | 0.112 | 0.510 | <0.001% |
| chr5_1119466_G_T | chr5:1119466 | -0.287 | -0.575 | -0.510 | 0.0039% |
| chr5_1119601_A_G | chr5:1119601 | -0.322 | -0.473 | -0.301 | 0.0020% |
| chr5_1119650_T_A | chr5:1119650 | 0.322 | 0.367 | 0.314 | 0.0013% |
| chr5_1107405_C_T | chr5:1107405 | 0.318 | 0.243 | 0.144 | 0.028% |
| chr5_1105546_C_T | chr5:1105546 | -0.313 | -0.118 | -0.275 | 0.0013% |
| chr5_1105822_C_T | chr5:1105822 | 0.091 | 0.173 | 0.497 | 0.0013% |
| chr5_1107651_C_T | chr5:1107651 | 0.313 | 0.326 | 0.209 | <0.001% |
| chr5_1119708_C_G | chr5:1119708 | 0.266 | 0.371 | 0.497 | 0.0052% |
| chr5_1106007_C_T | chr5:1106007 | -0.311 | -0.089 | -0.209 | 0.0033% |
| chr5_1112060_G_C | chr5:1112060 | -0.126 | -0.113 | -0.493 | <0.001% |
| chr5_1103754_C_T | chr5:1103754 | -0.309 | -0.188 | -0.340 | <0.001% |
| chr5_1119717_C_T | chr5:1119717 | 0.309 | 0.450 | 0.353 | 0.0020% |
| chr5_1106140_T_C | chr5:1106140 | 0.305 | 0.169 | 0.157 | <0.001% |
| chr5_1111825_C_T | chr5:1111825 | 0.027 | 0.091 | 0.484 | 0.0013% |
| chr5_1111908_C_A | chr5:1111908 | 0.082 | 0.105 | 0.484 | <0.001% |
| chr5_1111941_G_A | chr5:1111941 | 0.026 | 0.081 | 0.484 | 0.0013% |
| chr5_1118910_C_T | chr5:1118910 | -0.138 | -0.157 | -0.484 | 0.0013% |
| chr5_1119553_G_A | chr5:1119553 | -0.258 | -0.393 | -0.484 | <0.001% |
| chr5_1105649_C_T | chr5:1105649 | 0.301 | -0.169 | 0.301 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.