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SPG21
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SPG21
chr15:64,863,021..65,089,914, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_64905699_C_A | chr15:64905699 | -1.000 | -0.411 | -1.000 | 0.0079% |
| chr15_64905699_C_G | chr15:64905699 | -1.000 | -0.428 | -1.000 | <0.001% |
| chr15_64905699_C_T | chr15:64905699 | -1.000 | -0.405 | -1.000 | 0.0039% |
| chr15_64905695_C_T | chr15:64905695 | -1.000 | -0.495 | -1.000 | 0.017% |
| chr15_64905697_C_T | chr15:64905697 | -1.000 | -0.440 | -1.000 | <0.001% |
| chr15_64884186_T_C | chr15:64884186 | -0.559 | -0.670 | -1.000 | <0.001% |
| chr15_64884191_C_G | chr15:64884191 | -0.411 | -0.662 | -1.000 | 0.047% |
| chr15_64905706_C_A | chr15:64905706 | -1.000 | -0.316 | -1.000 | <0.001% |
| chr15_64884191_C_T | chr15:64884191 | -0.338 | -0.571 | -1.000 | <0.001% |
| chr15_64895886_C_T | chr15:64895886 | -0.211 | -0.680 | -1.000 | <0.001% |
| chr15_64894003_C_T | chr15:64894003 | 0.032 | -0.449 | -1.000 | 0.0020% |
| chr15_64893999_G_C | chr15:64893999 | -0.068 | -0.208 | -1.000 | <0.001% |
| chr15_64894238_C_G | chr15:64894238 | 0.360 | 0.354 | 1.000 | 0.0020% |
| chr15_64884231_C_T | chr15:64884231 | -0.449 | -0.409 | -1.000 | 0.0013% |
| chr15_64911833_A_G | chr15:64911833 | -0.404 | -0.164 | -1.000 | <0.001% |
| chr15_64895889_A_G | chr15:64895889 | -0.143 | -0.360 | -1.000 | <0.001% |
| chr15_64884173_A_C | chr15:64884173 | 0.333 | 0.056 | 1.000 | <0.001% |
| chr15_64894020_G_A | chr15:64894020 | -0.175 | -0.162 | -1.000 | <0.001% |
| chr15_64911840_G_C | chr15:64911840 | -0.309 | -0.156 | -1.000 | <0.001% |
| chr15_64867226_G_C | chr15:64867226 | 0.656 | 0.438 | 1.000 | 0.0013% |
| chr15_64893989_G_T | chr15:64893989 | -0.133 | -0.107 | -1.000 | <0.001% |
| chr15_64884177_G_T | chr15:64884177 | -0.334 | -0.505 | -1.000 | <0.001% |
| chr15_64894111_C_T | chr15:64894111 | 0.185 | 0.320 | 1.000 | <0.001% |
| chr15_64894110_C_T | chr15:64894110 | 0.288 | 0.381 | 1.000 | 0.0026% |
| chr15_64884176_C_T | chr15:64884176 | 0.584 | 0.701 | 0.959 | <0.001% |
| chr15_64894168_T_G | chr15:64894168 | 0.003 | -0.259 | -1.000 | <0.001% |
| chr15_64911846_T_C | chr15:64911846 | 0.346 | 0.021 | 0.988 | <0.001% |
| chr15_64911934_C_T | chr15:64911934 | 0.233 | 0.335 | 0.976 | 0.0013% |
| chr15_64893989_G_A | chr15:64893989 | -0.223 | -0.272 | -0.941 | 0.0013% |
| chr15_64894023_C_G | chr15:64894023 | 0.145 | 0.221 | 0.929 | 0.0026% |
| chr15_64884428_G_C | chr15:64884428 | -0.250 | -0.310 | -0.915 | <0.001% |
| chr15_64873192_A_G | chr15:64873192 | -0.147 | -0.141 | -0.912 | <0.001% |
| chr15_64911856_T_C | chr15:64911856 | -0.175 | -0.104 | -0.888 | <0.001% |
| chr15_64911945_G_A | chr15:64911945 | 0.213 | 0.202 | 0.882 | <0.001% |
| chr15_64893937_T_G | chr15:64893937 | 0.146 | 0.051 | 0.859 | <0.001% |
| chr15_64911817_G_T | chr15:64911817 | -0.318 | -0.160 | -0.847 | <0.001% |
| chr15_64911884_G_C | chr15:64911884 | -0.248 | -0.117 | -0.841 | <0.001% |
| chr15_64894060_C_A | chr15:64894060 | 0.170 | 0.152 | 0.835 | <0.001% |
| chr15_64894111_C_A | chr15:64894111 | 0.125 | 0.226 | 0.835 | <0.001% |
| chr15_64894207_G_A | chr15:64894207 | -0.088 | -0.206 | -0.835 | <0.001% |
| chr15_64884154_C_T | chr15:64884154 | 0.321 | 0.152 | 0.829 | 0.0026% |
| chr15_64867265_C_G | chr15:64867265 | 0.463 | 0.581 | 0.771 | <0.001% |
| chr15_64894114_C_G | chr15:64894114 | 0.168 | 0.003 | 0.800 | <0.001% |
| chr15_64911813_C_T | chr15:64911813 | -0.136 | -0.147 | -0.788 | <0.001% |
| chr15_64905747_C_A | chr15:64905747 | 0.441 | 0.025 | 0.135 | <0.001% |
| chr15_64894067_C_A | chr15:64894067 | -0.062 | -0.145 | -0.776 | 0.0026% |
| chr15_64894206_C_G | chr15:64894206 | 0.015 | -0.145 | -0.753 | 0.0020% |
| chr15_64894272_T_C | chr15:64894272 | 0.124 | 0.135 | 0.753 | <0.001% |
| chr15_64895881_C_T | chr15:64895881 | -0.046 | -0.123 | -0.747 | <0.001% |
| chr15_64884153_G_A | chr15:64884153 | -0.140 | -0.241 | -0.729 | 0.0013% |
| chr15_64894203_T_C | chr15:64894203 | -0.053 | -0.226 | -0.729 | 0.0026% |
| chr15_64894261_G_T | chr15:64894261 | -0.096 | -0.184 | -0.718 | <0.001% |
| chr15_64894109_A_T | chr15:64894109 | 0.188 | 0.269 | 0.706 | 0.0020% |
| chr15_64873220_C_T | chr15:64873220 | -0.109 | -0.075 | -0.700 | 0.0072% |
| chr15_64884152_C_T | chr15:64884152 | -0.231 | -0.277 | -0.700 | 0.0020% |
| chr15_64873094_A_G | chr15:64873094 | 0.137 | 0.154 | 0.682 | <0.001% |
| chr15_64884177_G_A | chr15:64884177 | -0.223 | -0.373 | -0.682 | 0.026% |
| chr15_64894226_T_C | chr15:64894226 | 0.012 | 0.264 | 0.671 | <0.001% |
| chr15_64884155_G_A | chr15:64884155 | -0.121 | -0.292 | -0.647 | 0.0026% |
| chr15_64894246_C_T | chr15:64894246 | -0.060 | -0.279 | -0.647 | 0.0092% |
| chr15_64895892_G_T | chr15:64895892 | -0.117 | -0.400 | -0.644 | 0.0013% |
| chr15_64895770_G_A | chr15:64895770 | 0.068 | 0.194 | 0.641 | 1.81% |
| chr15_64905748_T_A | chr15:64905748 | 0.356 | 0.030 | 0.200 | 2.18% |
| chr15_64911817_G_C | chr15:64911817 | -0.266 | -0.141 | -0.629 | 0.0013% |
| chr15_64884195_A_G | chr15:64884195 | -0.156 | -0.193 | -0.612 | <0.001% |
| chr15_64893985_T_A | chr15:64893985 | 0.080 | 0.140 | 0.612 | <0.001% |
| chr15_64894167_A_T | chr15:64894167 | -0.082 | -0.310 | -0.600 | 0.017% |
| chr15_64911815_G_A | chr15:64911815 | -0.158 | -0.104 | -0.582 | 0.0013% |
| chr15_64894225_C_G | chr15:64894225 | 0.075 | 0.228 | 0.576 | <0.001% |
| chr15_64905640_G_T | chr15:64905640 | 0.321 | 0.030 | 0.247 | <0.001% |
| chr15_64884184_G_T | chr15:64884184 | -0.226 | -0.203 | -0.565 | <0.001% |
| chr15_64911852_C_G | chr15:64911852 | -0.150 | -0.043 | -0.565 | <0.001% |
| chr15_64884207_C_T | chr15:64884207 | 0.308 | 0.269 | -0.559 | 0.0013% |
| chr15_64894105_G_A | chr15:64894105 | 0.171 | 0.231 | 0.553 | <0.001% |
| chr15_64894295_T_G | chr15:64894295 | -0.009 | 0.174 | 0.553 | <0.001% |
| chr15_64873212_T_G | chr15:64873212 | 0.172 | 0.065 | 0.541 | 0.0020% |
| chr15_64894062_C_G | chr15:64894062 | 0.160 | 0.038 | 0.541 | 0.0053% |
| chr15_64893994_G_C | chr15:64893994 | 0.012 | -0.058 | -0.529 | <0.001% |
| chr15_64894010_G_A | chr15:64894010 | 0.018 | 0.129 | 0.529 | 0.0013% |
| chr15_64895754_G_C | chr15:64895754 | 0.130 | 0.270 | 0.524 | <0.001% |
| chr15_64884154_C_A | chr15:64884154 | -0.088 | -0.104 | -0.518 | 0.0020% |
| chr15_64894113_C_A | chr15:64894113 | 0.050 | 0.137 | 0.518 | <0.001% |
| chr15_64894279_A_C | chr15:64894279 | -0.041 | -0.240 | -0.518 | 0.0013% |
| chr15_64911682_C_G | chr15:64911682 | 0.050 | -0.003 | 0.518 | 0.012% |
| chr15_64865240_G_A | chr15:64865240 | 0.291 | 0.194 | -0.235 | 0.110% |
| chr15_64884172_C_T | chr15:64884172 | 0.015 | -0.244 | -0.506 | <0.001% |
| chr15_64895759_G_A | chr15:64895759 | 0.105 | 0.340 | 0.506 | <0.001% |
| chr15_64911820_T_C | chr15:64911820 | -0.161 | -0.072 | -0.500 | 0.019% |
| chr15_64893966_T_C | chr15:64893966 | -0.073 | -0.104 | -0.494 | <0.001% |
| chr15_64894064_G_A | chr15:64894064 | -0.060 | -0.099 | -0.494 | 0.0085% |
| chr15_64905632_C_G | chr15:64905632 | -0.280 | -0.011 | -0.188 | <0.001% |
| chr15_64895785_G_A | chr15:64895785 | 0.052 | 0.112 | 0.491 | <0.001% |
| chr15_64873170_G_A | chr15:64873170 | -0.186 | -0.033 | -0.488 | <0.001% |
| chr15_64911643_C_G | chr15:64911643 | -0.173 | -0.085 | -0.488 | 0.0020% |
| chr15_64894016_G_A | chr15:64894016 | -0.037 | -0.048 | -0.482 | 0.0026% |
| chr15_64894040_C_T | chr15:64894040 | 0.090 | 0.102 | -0.482 | 0.0013% |
| chr15_64894243_G_A | chr15:64894243 | -0.027 | -0.174 | -0.482 | 0.0033% |
| chr15_64895769_G_A | chr15:64895769 | 0.032 | 0.128 | 0.479 | <0.001% |
| chr15_64894065_C_A | chr15:64894065 | 0.005 | -0.028 | -0.471 | 0.0013% |
| chr15_64894101_A_G | chr15:64894101 | 0.146 | 0.198 | 0.471 | <0.001% |
| chr15_64911946_G_A | chr15:64911946 | 0.085 | 0.173 | 0.465 | <0.001% |
| chr15_64873166_A_G | chr15:64873166 | -0.133 | -0.025 | -0.459 | <0.001% |
| chr15_64911906_C_G | chr15:64911906 | -0.080 | -0.070 | -0.459 | <0.001% |
| chr15_64895919_A_C | chr15:64895919 | 0.128 | 0.183 | 0.456 | <0.001% |
| chr15_64884409_G_A | chr15:64884409 | 0.171 | 0.127 | 0.453 | 21.0% |
| chr15_64911845_G_C | chr15:64911845 | -0.131 | -0.115 | -0.441 | <0.001% |
| chr15_64873096_C_T | chr15:64873096 | 0.138 | 0.048 | 0.435 | <0.001% |
| chr15_64894224_G_T | chr15:64894224 | 0.051 | 0.061 | 0.435 | <0.001% |
| chr15_64895925_G_A | chr15:64895925 | -0.107 | -0.166 | -0.432 | 0.0053% |
| chr15_64867228_G_A | chr15:64867228 | 0.215 | 0.185 | 0.418 | 0.0026% |
| chr15_64884446_G_A | chr15:64884446 | -0.015 | -0.122 | -0.418 | 0.012% |
| chr15_64911888_C_A | chr15:64911888 | 0.140 | 0.063 | 0.418 | 0.120% |
| chr15_64911891_G_T | chr15:64911891 | 0.098 | 0.053 | 0.418 | 0.153% |
| chr15_64894033_A_G | chr15:64894033 | -0.058 | 0.089 | -0.412 | 0.0026% |
| chr15_64894052_A_G | chr15:64894052 | 0.032 | 0.033 | 0.412 | <0.001% |
| chr15_64911753_G_T | chr15:64911753 | -0.230 | -0.055 | -0.235 | <0.001% |
| chr15_64873191_G_T | chr15:64873191 | -0.110 | -0.086 | -0.400 | 0.0013% |
| chr15_64911784_G_T | chr15:64911784 | 0.215 | 0.086 | 0.400 | <0.001% |
| chr15_64873237_C_T | chr15:64873237 | -0.075 | -0.099 | -0.394 | 35.3% |
| chr15_64894297_T_C | chr15:64894297 | 0.047 | 0.081 | 0.394 | <0.001% |
| chr15_64905690_T_A | chr15:64905690 | -0.223 | -0.061 | -0.112 | <0.001% |
| chr15_64895771_G_T | chr15:64895771 | 0.011 | 0.114 | 0.391 | 0.498% |
| chr15_64893960_A_C | chr15:64893960 | 0.038 | -0.020 | 0.388 | 1.77% |
| chr15_64894074_C_T | chr15:64894074 | -0.050 | -0.096 | -0.388 | <0.001% |
| chr15_64873209_A_G | chr15:64873209 | 0.007 | -0.010 | 0.382 | 0.037% |
| chr15_64911898_C_T | chr15:64911898 | -0.111 | -0.051 | -0.382 | <0.001% |
| chr15_64911914_G_A | chr15:64911914 | 0.151 | 0.051 | 0.382 | 0.0033% |
| chr15_64865320_C_T | chr15:64865320 | 0.215 | 0.168 | -0.353 | 0.0013% |
| chr15_64884190_T_G | chr15:64884190 | 0.110 | 0.292 | -0.376 | 0.0013% |
| chr15_64905627_C_A | chr15:64905627 | -0.090 | -0.018 | -0.365 | <0.001% |
| chr15_64911885_C_T | chr15:64911885 | 0.052 | 0.062 | 0.365 | 0.0066% |
| chr15_64895769_G_C | chr15:64895769 | 0.016 | 0.062 | 0.362 | 0.0033% |
| chr15_64884198_G_A | chr15:64884198 | -0.196 | -0.218 | -0.359 | <0.001% |
| chr15_64911818_C_T | chr15:64911818 | -0.131 | -0.065 | -0.359 | <0.001% |
| chr15_64911844_C_G | chr15:64911844 | -0.078 | -0.087 | -0.359 | 0.019% |
| chr15_64894277_G_C | chr15:64894277 | 0.062 | 0.082 | 0.353 | 0.050% |
| chr15_64911942_G_C | chr15:64911942 | -0.108 | -0.102 | -0.347 | <0.001% |
| chr15_64911620_A_G | chr15:64911620 | 0.140 | 0.051 | 0.341 | <0.001% |
| chr15_64894173_G_A | chr15:64894173 | 0.073 | 0.137 | 0.329 | 0.0013% |
| chr15_64911680_A_G | chr15:64911680 | 0.032 | 0.044 | 0.329 | <0.001% |
| chr15_64905604_G_T | chr15:64905604 | 0.185 | -0.011 | 0.024 | 0.0033% |
| chr15_64894178_T_C | chr15:64894178 | -0.102 | -0.114 | -0.324 | 0.0020% |
| chr15_64894233_G_T | chr15:64894233 | -0.042 | -0.094 | -0.324 | 0.0013% |
| chr15_64905737_C_A | chr15:64905737 | 0.181 | 0.029 | 0.094 | <0.001% |
| chr15_64911844_C_A | chr15:64911844 | 0.082 | 0.014 | 0.318 | 0.011% |
| chr15_64905713_C_A | chr15:64905713 | 0.176 | -0.013 | -0.024 | <0.001% |
| chr15_64894055_A_G | chr15:64894055 | 0.090 | 0.086 | 0.306 | 0.0020% |
| chr15_64894238_C_T | chr15:64894238 | 0.042 | 0.133 | 0.306 | <0.001% |
| chr15_64911602_G_A | chr15:64911602 | -0.053 | 0.004 | -0.306 | <0.001% |
| chr15_64884416_G_T | chr15:64884416 | 0.172 | 0.170 | 0.247 | 0.347% |
| chr15_64863432_G_T | chr15:64863432 | 0.065 | 0.067 | 0.300 | 0.251% |
| chr15_64884207_C_A | chr15:64884207 | 0.065 | 0.122 | -0.300 | 0.512% |
| chr15_64884266_G_A | chr15:64884266 | 0.168 | 0.048 | -0.182 | 0.0092% |
| chr15_64894125_C_T | chr15:64894125 | 0.045 | 0.122 | 0.294 | 6.39% |
| chr15_64894220_G_C | chr15:64894220 | 0.039 | -0.113 | -0.294 | <0.001% |
| chr15_64894229_A_C | chr15:64894229 | 0.082 | 0.190 | 0.294 | <0.001% |
| chr15_64911782_G_T | chr15:64911782 | 0.101 | 0.029 | 0.294 | 0.244% |
| chr15_64863306_A_C | chr15:64863306 | 0.082 | 0.048 | 0.288 | <0.001% |
| chr15_64911595_T_C | chr15:64911595 | 0.068 | 0.041 | 0.288 | 0.029% |
| chr15_64911901_C_T | chr15:64911901 | 0.057 | 0.057 | 0.288 | <0.001% |
| chr15_64865321_C_T | chr15:64865321 | -0.103 | -0.084 | 0.282 | 0.0020% |
| chr15_64865335_G_A | chr15:64865335 | -0.160 | -0.129 | 0.229 | <0.001% |
| chr15_64894026_C_T | chr15:64894026 | 0.040 | 0.198 | 0.282 | <0.001% |
| chr15_64894220_G_A | chr15:64894220 | 0.058 | 0.127 | 0.282 | <0.001% |
| chr15_64894240_G_C | chr15:64894240 | 0.036 | -0.038 | -0.282 | <0.001% |
| chr15_64911820_T_G | chr15:64911820 | -0.048 | -0.077 | -0.282 | <0.001% |
| chr15_64894285_C_T | chr15:64894285 | -0.045 | -0.070 | -0.276 | 4.02% |
| chr15_64865330_G_C | chr15:64865330 | 0.155 | 0.103 | -0.271 | 0.037% |
| chr15_64894180_T_G | chr15:64894180 | 0.073 | 0.132 | 0.271 | 0.014% |
| chr15_64894269_G_A | chr15:64894269 | -0.027 | -0.022 | -0.271 | <0.001% |
| chr15_64911980_G_A | chr15:64911980 | 0.048 | 0.025 | 0.265 | <0.001% |
| chr15_64893974_A_G | chr15:64893974 | 0.043 | 0.084 | 0.259 | 0.0020% |
| chr15_64905632_C_T | chr15:64905632 | -0.101 | -0.046 | -0.259 | <0.001% |
| chr15_64911578_G_A | chr15:64911578 | -0.070 | -0.003 | -0.259 | <0.001% |
| chr15_64911596_G_A | chr15:64911596 | 0.130 | 0.033 | 0.259 | 0.022% |
| chr15_64895639_A_C | chr15:64895639 | 0.021 | 0.015 | 0.256 | <0.001% |
| chr15_64905585_C_G | chr15:64905585 | 0.145 | -0.013 | 0.159 | 0.0033% |
| chr15_64873130_A_G | chr15:64873130 | 0.059 | 0.048 | 0.253 | 0.0013% |
| chr15_64911528_T_C | chr15:64911528 | -0.100 | 0.085 | -0.253 | 0.0026% |
| chr15_64893997_C_T | chr15:64893997 | 0.015 | 0.069 | -0.247 | <0.001% |
| chr15_64894063_C_A | chr15:64894063 | 0.062 | 0.028 | 0.247 | 0.0020% |
| chr15_64894094_G_A | chr15:64894094 | 0.007 | -0.071 | -0.247 | 0.0020% |
| chr15_64911770_G_T | chr15:64911770 | 0.083 | 0.037 | 0.247 | <0.001% |
| chr15_64865351_C_G | chr15:64865351 | 0.138 | 0.123 | -0.200 | 0.0013% |
| chr15_64884509_C_G | chr15:64884509 | 0.084 | 0.036 | 0.244 | 0.0085% |
| chr15_64895829_G_A | chr15:64895829 | 0.005 | 0.023 | 0.244 | <0.001% |
| chr15_64865361_A_T | chr15:64865361 | -0.082 | -0.029 | 0.241 | <0.001% |
| chr15_64905806_C_A | chr15:64905806 | 0.058 | 0.102 | 0.241 | <0.001% |
| chr15_64905585_C_T | chr15:64905585 | 0.135 | 0.020 | 0.118 | 0.0013% |
| chr15_64865332_G_T | chr15:64865332 | 0.133 | 0.099 | -0.141 | 0.0092% |
| chr15_64894128_T_C | chr15:64894128 | 0.033 | 0.030 | 0.235 | <0.001% |
| chr15_64894211_G_A | chr15:64894211 | -0.028 | -0.124 | -0.235 | 0.0033% |
| chr15_64894233_G_C | chr15:64894233 | 0.038 | 0.053 | 0.235 | 0.0046% |
| chr15_64911942_G_T | chr15:64911942 | -0.065 | -0.088 | -0.235 | <0.001% |
| chr15_64863302_A_G | chr15:64863302 | -0.066 | -0.072 | -0.232 | 0.0013% |
| chr15_64865293_C_T | chr15:64865293 | -0.062 | -0.028 | 0.229 | 0.0026% |
| chr15_64895765_G_A | chr15:64895765 | 0.062 | 0.184 | 0.229 | 0.0046% |
| chr15_64911842_C_G | chr15:64911842 | -0.038 | -0.037 | -0.229 | 0.0059% |
| chr15_64911922_A_G | chr15:64911922 | -0.103 | -0.032 | -0.229 | 0.011% |
| chr15_64911753_G_A | chr15:64911753 | -0.128 | 0.014 | 0.076 | 0.0013% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.