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SS18L1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SS18L1
chr20:62,043,768..62,282,514, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr20_62060801_C_T | chr20:62060801 | 30,496 | 4,672 | 37,504 | 6.6e-6 |
| chr20_62060808_A_T | chr20:62060808 | 10,016 | 4,960 | 10,240 | — |
| chr20_62121705_T_G | chr20:62121705 | 8,832 | 2,240 | 8,192 | — |
| chr20_62121713_G_T | chr20:62121713 | -8,576 | -544 | -5,632 | — |
| chr20_62121682_G_A | chr20:62121682 | -7,424 | -992 | -3,840 | — |
| chr20_62060746_C_G | chr20:62060746 | 7,104 | 2,560 | 8,832 | — |
| chr20_62121706_A_G | chr20:62121706 | 6,784 | 1,760 | 3,584 | — |
| chr20_62121707_T_C | chr20:62121707 | 6,528 | 1,472 | 4,096 | — |
| chr20_62121696_G_A | chr20:62121696 | 6,272 | 1,024 | -3,072 | — |
| chr20_62121708_T_C | chr20:62121708 | 6,272 | 160 | 2,560 | — |
| chr20_62121715_G_A | chr20:62121715 | -6,016 | -1,216 | -5,632 | — |
| chr20_62121707_T_G | chr20:62121707 | 4,352 | 1,536 | 2,048 | — |
| chr20_62121708_T_G | chr20:62121708 | 4,352 | 1,024 | 2,560 | — |
| chr20_62121677_C_A | chr20:62121677 | 4,224 | 544 | 3,840 | 1.8e-4 |
| chr20_62121683_C_A | chr20:62121683 | -4,224 | -640 | -2,048 | — |
| chr20_62121675_C_G | chr20:62121675 | -4,096 | 320 | 1,792 | 1.3e-5 |
| chr20_62121701_A_T | chr20:62121701 | 4,096 | 384 | 2,048 | — |
| chr20_62121699_A_C | chr20:62121699 | -3,968 | -512 | -1,024 | — |
| chr20_62121704_T_G | chr20:62121704 | 3,968 | 320 | 3,328 | — |
| chr20_62060801_C_A | chr20:62060801 | 3,936 | 400 | 3,712 | — |
| chr20_62121712_A_C | chr20:62121712 | 3,840 | 1,728 | 4,096 | — |
| chr20_62121662_G_A | chr20:62121662 | 3,840 | 384 | -2,560 | — |
| chr20_62121681_G_T | chr20:62121681 | -3,840 | -32 | 1,024 | — |
| chr20_62121695_A_T | chr20:62121695 | -3,840 | -1,088 | -1,536 | — |
| chr20_62121709_T_C | chr20:62121709 | 3,840 | 480 | 2,048 | — |
| chr20_62121672_A_G | chr20:62121672 | -3,712 | -64 | 512 | — |
| chr20_62060808_A_C | chr20:62060808 | 3,680 | 1,280 | 4,864 | — |
| chr20_62121682_G_C | chr20:62121682 | -3,584 | -192 | 256 | — |
| chr20_62121713_G_C | chr20:62121713 | 3,584 | 2,080 | 512 | — |
| chr20_62102706_T_A | chr20:62102706 | 3,552 | 32 | 2,048 | — |
| chr20_62121705_T_C | chr20:62121705 | 3,328 | 672 | 6,656 | — |
| chr20_62121700_G_A | chr20:62121700 | -3,328 | -544 | -4,864 | — |
| chr20_62060804_C_G | chr20:62060804 | 3,328 | 528 | 4,352 | — |
| chr20_62121661_G_T | chr20:62121661 | 3,328 | 480 | 2,048 | — |
| chr20_62121662_G_C | chr20:62121662 | 3,328 | 64 | -768 | — |
| chr20_62121688_G_C | chr20:62121688 | -3,328 | 64 | -512 | — |
| chr20_62121691_A_T | chr20:62121691 | -3,328 | -544 | -2,560 | — |
| chr20_62060801_C_G | chr20:62060801 | 3,296 | -96 | 5,632 | — |
| chr20_62121709_T_G | chr20:62121709 | 3,200 | 800 | -512 | — |
| chr20_62121692_G_T | chr20:62121692 | -3,072 | -1,024 | -3,328 | — |
| chr20_62121681_G_A | chr20:62121681 | -3,072 | -96 | 256 | 6.6e-6 |
| chr20_62121690_T_A | chr20:62121690 | 3,072 | 1,344 | -256 | — |
| chr20_62121673_G_A | chr20:62121673 | 2,944 | 416 | -1,024 | — |
| chr20_62121688_G_T | chr20:62121688 | -2,944 | -448 | -1,280 | — |
| chr20_62121695_A_C | chr20:62121695 | -2,944 | -704 | -768 | — |
| chr20_62121707_T_A | chr20:62121707 | 2,944 | 480 | 1,536 | — |
| chr20_62121674_G_A | chr20:62121674 | -2,816 | -768 | -2,560 | — |
| chr20_62121710_T_G | chr20:62121710 | 2,816 | 864 | 256 | — |
| chr20_62121692_G_C | chr20:62121692 | -2,688 | -864 | -3,840 | — |
| chr20_62121661_G_A | chr20:62121661 | 2,688 | 448 | 512 | — |
| chr20_62121701_A_G | chr20:62121701 | -2,688 | -288 | 1,536 | — |
| chr20_62121702_A_C | chr20:62121702 | -2,688 | -320 | 768 | — |
| chr20_62121709_T_A | chr20:62121709 | 2,560 | 64 | -3,584 | — |
| chr20_62121693_C_A | chr20:62121693 | -2,560 | -512 | -1,280 | — |
| chr20_62121712_A_G | chr20:62121712 | -2,560 | -32 | -2,048 | — |
| chr20_62121697_T_A | chr20:62121697 | -2,432 | -928 | -3,584 | — |
| chr20_62121685_C_G | chr20:62121685 | 2,432 | -64 | -1,792 | — |
| chr20_62121694_C_G | chr20:62121694 | -2,432 | 352 | 0 | — |
| chr20_62121711_A_T | chr20:62121711 | -2,432 | -800 | 512 | — |
| chr20_62121714_G_A | chr20:62121714 | -2,304 | 192 | -5,632 | — |
| chr20_62121665_C_A | chr20:62121665 | -2,304 | -672 | -2,816 | — |
| chr20_62121677_C_G | chr20:62121677 | 2,304 | 0 | 768 | — |
| chr20_62121676_T_C | chr20:62121676 | 2,176 | 192 | -768 | — |
| chr20_62121684_C_T | chr20:62121684 | -2,176 | -576 | -1,536 | — |
| chr20_62121694_C_A | chr20:62121694 | -2,176 | -192 | -1,792 | — |
| chr20_62121660_G_A | chr20:62121660 | -2,112 | -288 | -768 | 6.6e-6 |
| chr20_62121660_G_C | chr20:62121660 | -2,112 | -576 | -1,792 | — |
| chr20_62060805_C_G | chr20:62060805 | 2,048 | 256 | 3,328 | — |
| chr20_62121691_A_C | chr20:62121691 | -2,048 | -544 | -3,072 | — |
| chr20_62121706_A_C | chr20:62121706 | 2,048 | 704 | 0 | — |
| chr20_62121708_T_A | chr20:62121708 | 2,048 | 256 | 0 | — |
| chr20_62060802_C_G | chr20:62060802 | 1,984 | 480 | 3,968 | — |
| chr20_62121662_G_T | chr20:62121662 | 1,984 | 96 | -256 | — |
| chr20_62121698_C_A | chr20:62121698 | -1,920 | -1,024 | -3,328 | — |
| chr20_62121673_G_T | chr20:62121673 | -1,920 | -736 | -3,072 | — |
| chr20_62060689_A_C | chr20:62060689 | 1,920 | 352 | 2,432 | — |
| chr20_62121674_G_T | chr20:62121674 | -1,920 | -256 | -2,304 | — |
| chr20_62121700_G_T | chr20:62121700 | -1,920 | -576 | -2,048 | — |
| chr20_62121658_C_G | chr20:62121658 | 1,920 | -480 | -1,280 | — |
| chr20_62121661_G_C | chr20:62121661 | 1,792 | -32 | 256 | — |
| chr20_62121668_G_T | chr20:62121668 | 1,792 | 352 | 1,024 | — |
| chr20_62121685_C_T | chr20:62121685 | 1,792 | 32 | 768 | — |
| chr20_62060804_C_A | chr20:62060804 | 1,728 | 272 | 2,560 | — |
| chr20_62060802_C_T | chr20:62060802 | 1,696 | 368 | 1,920 | — |
| chr20_62060820_C_A | chr20:62060820 | 1,696 | 592 | 0 | — |
| chr20_62121704_T_C | chr20:62121704 | 1,664 | -352 | 2,304 | — |
| chr20_62121703_T_G | chr20:62121703 | 1,664 | 352 | 2,048 | — |
| chr20_62121663_T_C | chr20:62121663 | 1,664 | -384 | 256 | — |
| chr20_62121667_A_G | chr20:62121667 | 1,664 | 32 | 256 | — |
| chr20_62121681_G_C | chr20:62121681 | -1,664 | -384 | -768 | — |
| chr20_62121713_G_A | chr20:62121713 | 1,664 | 640 | -1,536 | 6.6e-6 |
| chr20_62102736_T_G | chr20:62102736 | -1,616 | 32 | 960 | — |
| chr20_62121664_A_T | chr20:62121664 | -1,600 | 832 | 2,048 | — |
| chr20_62060691_G_C | chr20:62060691 | 1,568 | 352 | 2,432 | — |
| chr20_62121669_C_A | chr20:62121669 | -1,536 | -32 | -1,792 | 6.6e-6 |
| chr20_62121668_G_C | chr20:62121668 | 1,536 | 160 | 256 | — |
| chr20_62121669_C_G | chr20:62121669 | -1,536 | 224 | 256 | — |
| chr20_62060754_G_T | chr20:62060754 | 1,472 | 592 | 1,024 | — |
| chr20_62060818_A_C | chr20:62060818 | 1,440 | 512 | 3,328 | — |
| chr20_62121679_G_T | chr20:62121679 | 1,408 | 608 | 3,328 | — |
| chr20_62121684_C_A | chr20:62121684 | -1,408 | 192 | 2,304 | — |
| chr20_62121696_G_C | chr20:62121696 | -1,408 | -416 | -1,536 | — |
| chr20_62102682_A_C | chr20:62102682 | 1,392 | 32 | 1,792 | — |
| chr20_62060730_C_G | chr20:62060730 | 1,376 | 320 | 2,560 | — |
| chr20_62060781_A_G | chr20:62060781 | -1,376 | -144 | -2,048 | — |
| chr20_62060788_G_C | chr20:62060788 | -1,344 | -144 | -4,352 | — |
| chr20_62060800_C_G | chr20:62060800 | 1,344 | 80 | 2,304 | — |
| chr20_62060730_C_A | chr20:62060730 | 1,344 | 320 | 1,664 | — |
| chr20_62060767_T_C | chr20:62060767 | -1,312 | -272 | -3,712 | — |
| chr20_62060782_A_C | chr20:62060782 | -1,312 | -240 | -2,176 | — |
| chr20_62121714_G_T | chr20:62121714 | -1,280 | 896 | -3,584 | — |
| chr20_62060727_C_A | chr20:62060727 | 1,184 | 272 | 1,920 | — |
| chr20_62121703_T_C | chr20:62121703 | 1,152 | 480 | 5,120 | — |
| chr20_62060798_G_A | chr20:62060798 | -1,152 | -160 | -2,688 | — |
| chr20_62060691_G_T | chr20:62060691 | 1,152 | 288 | 1,664 | — |
| chr20_62060727_C_G | chr20:62060727 | 1,024 | 176 | 3,072 | — |
| chr20_62060803_A_G | chr20:62060803 | 1,024 | -16 | 2,432 | — |
| chr20_62060729_T_C | chr20:62060729 | -992 | -192 | -2,432 | — |
| chr20_62060785_A_C | chr20:62060785 | -928 | -352 | -4,608 | — |
| chr20_62121689_G_A | chr20:62121689 | -896 | -288 | 3,328 | — |
| chr20_62060768_C_G | chr20:62060768 | 896 | 176 | 2,816 | — |
| chr20_62121675_C_T | chr20:62121675 | 896 | 832 | 2,560 | — |
| chr20_62121680_A_T | chr20:62121680 | -896 | 96 | 2,560 | — |
| chr20_62121697_T_G | chr20:62121697 | -896 | -544 | -2,048 | — |
| chr20_62060728_C_A | chr20:62060728 | 896 | 160 | 1,664 | — |
| chr20_62121672_A_C | chr20:62121672 | 896 | -160 | 1,536 | — |
| chr20_62060797_T_A | chr20:62060797 | -864 | -192 | -2,432 | — |
| chr20_62060730_C_T | chr20:62060730 | 832 | 272 | 1,664 | — |
| chr20_62121701_A_C | chr20:62121701 | -768 | 704 | 5,632 | — |
| chr20_62121665_C_T | chr20:62121665 | -768 | -224 | -3,584 | — |
| chr20_62121691_A_G | chr20:62121691 | 768 | -1,152 | -2,048 | — |
| chr20_62060728_C_G | chr20:62060728 | 768 | 112 | 1,920 | — |
| chr20_62121679_G_A | chr20:62121679 | -768 | 32 | 1,536 | 1.3e-5 |
| chr20_62121702_A_G | chr20:62121702 | 768 | 160 | 1,536 | 6.6e-6 |
| chr20_62060757_A_C | chr20:62060757 | -736 | -176 | -2,560 | — |
| chr20_62060747_T_C | chr20:62060747 | -736 | -144 | -1,664 | — |
| chr20_62060754_G_C | chr20:62060754 | -704 | -192 | -2,176 | — |
| chr20_62060733_C_G | chr20:62060733 | 672 | 192 | 2,176 | — |
| chr20_62060798_G_T | chr20:62060798 | -672 | -112 | -2,176 | — |
| chr20_62060813_T_G | chr20:62060813 | -672 | -288 | 2,176 | — |
| chr20_62121693_C_G | chr20:62121693 | -640 | -576 | -3,584 | — |
| chr20_62121667_A_C | chr20:62121667 | 640 | -288 | -2,816 | — |
| chr20_62121663_T_A | chr20:62121663 | 640 | -288 | -2,304 | — |
| chr20_62121678_C_G | chr20:62121678 | -640 | -256 | -2,048 | — |
| chr20_62121696_G_T | chr20:62121696 | -640 | -320 | -2,048 | — |
| chr20_62121672_A_T | chr20:62121672 | -640 | 192 | 1,792 | — |
| chr20_62121703_T_A | chr20:62121703 | 640 | 128 | 1,536 | 6.6e-6 |
| chr20_62060813_T_C | chr20:62060813 | -576 | -112 | -1,920 | — |
| chr20_62121690_T_C | chr20:62121690 | 512 | -384 | -2,560 | — |
| chr20_62121685_C_A | chr20:62121685 | -512 | 32 | 1,792 | — |
| chr20_62121690_T_G | chr20:62121690 | -512 | -640 | -1,792 | — |
| chr20_62060806_T_C | chr20:62060806 | -512 | -384 | -1,536 | — |
| chr20_62121704_T_A | chr20:62121704 | 512 | -224 | -1,536 | — |
| chr20_62102655_C_G | chr20:62102655 | -464 | 0 | -2,304 | — |
| chr20_62060754_G_A | chr20:62060754 | -448 | -80 | -2,688 | — |
| chr20_62121659_C_T | chr20:62121659 | 448 | 608 | 1,536 | — |
| chr20_62121663_T_G | chr20:62121663 | 384 | -256 | -2,560 | — |
| chr20_62121697_T_C | chr20:62121697 | 384 | -704 | -2,048 | — |
| chr20_62121694_C_T | chr20:62121694 | -384 | -32 | 1,792 | — |
| chr20_62121711_A_C | chr20:62121711 | 384 | 864 | 1,536 | — |
| chr20_62121712_A_T | chr20:62121712 | -384 | -288 | -1,536 | — |
| chr20_62060806_T_G | chr20:62060806 | -352 | -256 | 1,664 | — |
| chr20_62060796_G_T | chr20:62060796 | -320 | 80 | -2,048 | — |
| chr20_62102652_T_A | chr20:62102652 | 320 | -64 | 1,664 | — |
| chr20_62102644_A_C | chr20:62102644 | 304 | -64 | 1,472 | — |
| chr20_62060726_C_G | chr20:62060726 | 288 | 128 | 2,688 | — |
| chr20_62060720_A_C | chr20:62060720 | 288 | 32 | 2,048 | — |
| chr20_62102650_C_T | chr20:62102650 | -288 | -96 | -1,792 | — |
| chr20_62102643_A_C | chr20:62102643 | 256 | -48 | 2,112 | — |
| chr20_62060731_C_G | chr20:62060731 | 256 | 128 | 1,792 | — |
| chr20_62121665_C_G | chr20:62121665 | -256 | -256 | -1,792 | — |
| chr20_62060714_G_C | chr20:62060714 | -256 | -80 | -1,536 | — |
| chr20_62121706_A_T | chr20:62121706 | -256 | -192 | -1,536 | — |
| chr20_62102652_T_G | chr20:62102652 | -240 | -208 | -1,536 | — |
| chr20_62060769_C_G | chr20:62060769 | 224 | 32 | 2,432 | — |
| chr20_62060747_T_G | chr20:62060747 | -224 | -208 | 2,304 | — |
| chr20_62102659_A_G | chr20:62102659 | -192 | -64 | -2,496 | — |
| chr20_62060788_G_T | chr20:62060788 | 192 | 160 | -1,536 | — |
| chr20_62060794_G_T | chr20:62060794 | -192 | -80 | -1,536 | — |
| chr20_62102650_C_G | chr20:62102650 | -176 | -160 | -1,536 | — |
| chr20_62060775_G_A | chr20:62060775 | -160 | 0 | -2,048 | — |
| chr20_62060795_G_A | chr20:62060795 | 160 | 0 | -1,664 | — |
| chr20_62060732_A_G | chr20:62060732 | -160 | -64 | 1,536 | — |
| chr20_62121679_G_C | chr20:62121679 | -128 | 96 | 2,560 | — |
| chr20_62060770_C_G | chr20:62060770 | -128 | 0 | 2,176 | — |
| chr20_62121698_C_T | chr20:62121698 | -128 | -704 | -2,048 | 6.6e-6 |
| chr20_62121658_C_A | chr20:62121658 | 128 | 0 | 1,792 | — |
| chr20_62121664_A_C | chr20:62121664 | 128 | 256 | 1,792 | — |
| chr20_62060795_G_T | chr20:62060795 | 128 | 0 | -1,664 | — |
| chr20_62121670_G_C | chr20:62121670 | 128 | 96 | 1,536 | — |
| chr20_62060759_T_G | chr20:62060759 | -96 | -80 | 2,048 | — |
| chr20_62060738_G_A | chr20:62060738 | 96 | -48 | -1,536 | — |
| chr20_62060744_G_A | chr20:62060744 | -96 | 16 | -1,536 | — |
| chr20_62060794_G_A | chr20:62060794 | 64 | 48 | -2,048 | — |
| chr20_62102664_T_C | chr20:62102664 | -48 | -16 | 1,536 | — |
| chr20_62060714_G_T | chr20:62060714 | -32 | 16 | -1,792 | — |
| chr20_62060814_C_A | chr20:62060814 | 32 | 160 | -1,792 | — |
| chr20_62102687_T_A | chr20:62102687 | 16 | -48 | 2,048 | — |
| chr20_62121689_G_T | chr20:62121689 | 0 | -96 | 2,304 | — |
| chr20_62121687_C_A | chr20:62121687 | 0 | 224 | 1,536 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.