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TCN2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TCN2
chr22:30,507,082..30,727,271, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr22_30562653_G_T | chr22:30562653 | 130,800 | 45,152 | 68,224 | — |
| chr22_30562668_G_C | chr22:30562668 | 38,328 | 11,328 | 39,552 | — |
| chr22_30562644_G_C | chr22:30562644 | 37,760 | 7,488 | 13,568 | — |
| chr22_30562653_G_C | chr22:30562653 | 35,952 | 11,392 | 25,472 | 7.2e-5 |
| chr22_30562610_T_A | chr22:30562610 | 33,504 | 11,072 | 20,480 | — |
| chr22_30562741_G_A | chr22:30562741 | 33,456 | 14,144 | 23,616 | — |
| chr22_30562740_T_A | chr22:30562740 | 31,648 | 14,752 | 19,072 | — |
| chr22_30562663_T_C | chr22:30562663 | 31,616 | 11,904 | 22,144 | — |
| chr22_30562610_T_C | chr22:30562610 | -30,456 | -12,304 | -28,544 | — |
| chr22_30562620_T_C | chr22:30562620 | -30,368 | -12,160 | -35,072 | — |
| chr22_30562618_A_C | chr22:30562618 | -30,032 | -12,832 | -35,072 | — |
| chr22_30562618_A_G | chr22:30562618 | -29,728 | -12,784 | -34,944 | — |
| chr22_30562618_A_T | chr22:30562618 | -29,568 | -12,704 | -35,712 | — |
| chr22_30562606_A_C | chr22:30562606 | 29,456 | 11,808 | 23,168 | — |
| chr22_30562620_T_A | chr22:30562620 | -29,280 | -11,584 | -32,896 | — |
| chr22_30562671_T_C | chr22:30562671 | 28,736 | 11,680 | 15,104 | — |
| chr22_30562620_T_G | chr22:30562620 | -27,608 | -10,816 | -30,080 | — |
| chr22_30562616_T_G | chr22:30562616 | -27,392 | -10,960 | -32,256 | — |
| chr22_30562592_C_A | chr22:30562592 | 27,376 | 10,240 | 17,408 | 1.3e-5 |
| chr22_30562616_T_A | chr22:30562616 | -27,136 | -10,896 | -32,768 | — |
| chr22_30562634_C_A | chr22:30562634 | 26,928 | 9,920 | 22,528 | — |
| chr22_30562600_C_G | chr22:30562600 | 26,640 | 8,832 | 18,560 | — |
| chr22_30562622_A_T | chr22:30562622 | -26,032 | -10,176 | -32,512 | — |
| chr22_30562616_T_C | chr22:30562616 | -25,424 | -10,048 | -28,672 | — |
| chr22_30562622_A_G | chr22:30562622 | -24,672 | -9,616 | -28,928 | — |
| chr22_30562664_G_C | chr22:30562664 | 24,648 | 8,640 | 12,800 | — |
| chr22_30562622_A_C | chr22:30562622 | -24,488 | -9,104 | -30,080 | — |
| chr22_30562632_T_C | chr22:30562632 | -23,528 | -9,536 | -27,136 | — |
| chr22_30562634_C_G | chr22:30562634 | 23,088 | 8,576 | 18,176 | — |
| chr22_30562621_C_T | chr22:30562621 | -22,352 | -8,736 | -28,544 | — |
| chr22_30562621_C_G | chr22:30562621 | -21,840 | -8,464 | -27,136 | — |
| chr22_30562617_G_C | chr22:30562617 | -21,704 | -8,768 | -26,880 | — |
| chr22_30562617_G_A | chr22:30562617 | -21,632 | -8,784 | -27,136 | 4.6e-5 |
| chr22_30562677_T_A | chr22:30562677 | -21,584 | -8,704 | -22,528 | — |
| chr22_30562615_G_T | chr22:30562615 | -21,328 | -8,320 | -24,448 | — |
| chr22_30562604_C_T | chr22:30562604 | -21,312 | -7,760 | -23,296 | — |
| chr22_30562659_G_T | chr22:30562659 | 21,160 | 7,648 | 13,184 | — |
| chr22_30562635_C_G | chr22:30562635 | 20,992 | 8,192 | 16,256 | — |
| chr22_30562671_T_G | chr22:30562671 | 20,416 | 6,944 | 12,928 | — |
| chr22_30562617_G_T | chr22:30562617 | -20,040 | -7,824 | -23,808 | — |
| chr22_30562661_G_A | chr22:30562661 | 19,952 | 8,480 | 15,488 | — |
| chr22_30562677_T_G | chr22:30562677 | -19,816 | -8,176 | -21,248 | — |
| chr22_30562677_T_C | chr22:30562677 | -19,560 | -7,872 | -20,224 | — |
| chr22_30562667_T_A | chr22:30562667 | 19,016 | 7,968 | 14,592 | — |
| chr22_30562596_G_T | chr22:30562596 | -18,928 | -7,328 | -18,176 | — |
| chr22_30562691_G_A | chr22:30562691 | 18,912 | 8,928 | 13,312 | — |
| chr22_30562601_A_T | chr22:30562601 | 18,752 | 5,760 | 14,976 | — |
| chr22_30562596_G_C | chr22:30562596 | -18,592 | -6,880 | -16,640 | — |
| chr22_30562623_T_A | chr22:30562623 | -18,472 | -6,816 | -18,048 | — |
| chr22_30562588_C_G | chr22:30562588 | -18,400 | -7,456 | -17,536 | — |
| chr22_30562619_C_A | chr22:30562619 | -18,232 | -7,328 | -19,712 | — |
| chr22_30562737_A_T | chr22:30562737 | 18,168 | 7,136 | 18,944 | — |
| chr22_30562633_C_G | chr22:30562633 | 18,104 | 7,104 | 16,384 | — |
| chr22_30562619_C_T | chr22:30562619 | -18,056 | -7,360 | -19,200 | — |
| chr22_30562590_T_C | chr22:30562590 | 17,680 | 7,264 | 20,096 | 2.0e-5 |
| chr22_30562674_C_A | chr22:30562674 | 17,648 | 6,240 | 12,160 | — |
| chr22_30562668_G_A | chr22:30562668 | 17,640 | 6,592 | 16,256 | — |
| chr22_30562714_C_A | chr22:30562714 | 17,472 | 8,672 | 11,264 | — |
| chr22_30562684_C_G | chr22:30562684 | 17,384 | 7,424 | 9,856 | — |
| chr22_30635347_C_A | chr22:30635347 | -16,896 | -880 | -17,408 | — |
| chr22_30562630_G_C | chr22:30562630 | 16,624 | 8,064 | 11,392 | — |
| chr22_30562621_C_A | chr22:30562621 | -16,080 | -5,664 | -18,688 | — |
| chr22_30562591_G_C | chr22:30562591 | 15,872 | 5,408 | 11,648 | — |
| chr22_30562589_A_C | chr22:30562589 | 15,824 | 6,144 | 15,488 | — |
| chr22_30562611_A_G | chr22:30562611 | 15,296 | 5,312 | 13,312 | — |
| chr22_30562645_C_T | chr22:30562645 | -15,240 | -7,232 | -19,968 | — |
| chr22_30562656_T_G | chr22:30562656 | -15,216 | -5,840 | -16,384 | — |
| chr22_30562735_G_C | chr22:30562735 | 15,152 | 5,088 | 12,928 | — |
| chr22_30562615_G_C | chr22:30562615 | -14,296 | -5,600 | -14,336 | 6.6e-6 |
| chr22_30562603_G_C | chr22:30562603 | 14,144 | 5,472 | 9,856 | — |
| chr22_30562643_G_C | chr22:30562643 | -13,936 | -5,440 | -15,360 | — |
| chr22_30562610_T_G | chr22:30562610 | 13,616 | 5,152 | 8,704 | — |
| chr22_30562639_G_A | chr22:30562639 | -13,608 | -5,408 | -12,544 | — |
| chr22_30562683_T_G | chr22:30562683 | 13,344 | 4,928 | 9,088 | — |
| chr22_30562623_T_G | chr22:30562623 | -13,304 | -4,512 | -11,520 | — |
| chr22_30562647_C_G | chr22:30562647 | 13,104 | 4,320 | 12,928 | — |
| chr22_30562636_C_G | chr22:30562636 | 12,952 | 4,000 | 9,728 | — |
| chr22_30562648_C_G | chr22:30562648 | 12,736 | 5,408 | 13,824 | — |
| chr22_30562660_T_G | chr22:30562660 | -12,632 | -4,992 | -9,856 | — |
| chr22_30562667_T_G | chr22:30562667 | -12,536 | -5,344 | -13,440 | — |
| chr22_30562602_G_C | chr22:30562602 | 12,528 | 6,336 | 9,088 | — |
| chr22_30562634_C_T | chr22:30562634 | 12,384 | 4,640 | 9,344 | — |
| chr22_30562654_A_G | chr22:30562654 | 12,352 | 2,144 | 5,504 | — |
| chr22_30562751_G_A | chr22:30562751 | 12,144 | 5,184 | 7,360 | — |
| chr22_30562684_C_A | chr22:30562684 | 12,096 | 5,088 | 5,376 | — |
| chr22_30562646_A_G | chr22:30562646 | 12,088 | 3,648 | 12,032 | — |
| chr22_30562611_A_C | chr22:30562611 | 12,048 | 4,128 | 9,984 | — |
| chr22_30562682_C_T | chr22:30562682 | 12,024 | 4,960 | 3,200 | — |
| chr22_30562682_C_A | chr22:30562682 | -11,976 | -6,416 | -16,512 | — |
| chr22_30562675_C_T | chr22:30562675 | 11,768 | 5,280 | 10,112 | — |
| chr22_30562684_C_T | chr22:30562684 | 11,680 | 4,832 | 5,504 | — |
| chr22_30562680_C_T | chr22:30562680 | -11,376 | -5,472 | -12,864 | — |
| chr22_30562688_G_T | chr22:30562688 | 11,376 | 5,232 | 2,432 | — |
| chr22_30562686_G_A | chr22:30562686 | -11,224 | -5,152 | -13,632 | — |
| chr22_30562738_C_G | chr22:30562738 | -11,192 | -5,152 | -9,920 | — |
| chr22_30562687_G_A | chr22:30562687 | -11,144 | -5,408 | -13,760 | — |
| chr22_30562673_C_T | chr22:30562673 | 11,072 | 4,672 | 8,704 | — |
| chr22_30562613_C_G | chr22:30562613 | 11,040 | 4,096 | 8,832 | — |
| chr22_30562664_G_T | chr22:30562664 | 11,024 | 4,928 | 13,184 | 6.6e-6 |
| chr22_30562675_C_A | chr22:30562675 | 10,920 | 4,160 | 6,272 | — |
| chr22_30562591_G_A | chr22:30562591 | -10,816 | -4,352 | -10,112 | — |
| chr22_30562637_G_C | chr22:30562637 | -10,816 | -3,584 | -10,240 | — |
| chr22_30562670_C_A | chr22:30562670 | -10,728 | -4,320 | -10,880 | — |
| chr22_30562686_G_T | chr22:30562686 | -10,712 | -5,216 | -15,232 | — |
| chr22_30562590_T_G | chr22:30562590 | 10,640 | 3,552 | 11,392 | — |
| chr22_30562679_A_C | chr22:30562679 | -10,608 | -4,176 | -7,808 | — |
| chr22_30562630_G_A | chr22:30562630 | 10,528 | 4,192 | 6,272 | — |
| chr22_30562604_C_A | chr22:30562604 | -10,496 | -3,648 | -8,832 | 1.3e-5 |
| chr22_30562651_G_C | chr22:30562651 | -10,440 | -4,256 | -8,704 | — |
| chr22_30562653_G_A | chr22:30562653 | 10,280 | 4,640 | 6,912 | — |
| chr22_30562687_G_T | chr22:30562687 | -10,224 | -4,800 | -13,056 | — |
| chr22_30562604_C_G | chr22:30562604 | -10,224 | -3,776 | -8,576 | 2.3e-3 |
| chr22_30562712_G_C | chr22:30562712 | -10,192 | -3,888 | -8,768 | — |
| chr22_30562633_C_A | chr22:30562633 | 10,104 | 3,552 | 9,472 | — |
| chr22_30562708_T_A | chr22:30562708 | 10,096 | 3,968 | 5,696 | — |
| chr22_30562614_A_T | chr22:30562614 | -9,952 | -4,320 | -11,648 | — |
| chr22_30562632_T_A | chr22:30562632 | -9,944 | -3,872 | -9,856 | — |
| chr22_30562651_G_T | chr22:30562651 | -9,936 | -4,672 | -8,960 | — |
| chr22_30562624_C_A | chr22:30562624 | -9,864 | -3,520 | -10,624 | — |
| chr22_30562612_C_G | chr22:30562612 | 9,840 | 3,936 | 8,832 | — |
| chr22_30562666_A_C | chr22:30562666 | -9,688 | -4,672 | -9,088 | — |
| chr22_30562687_G_C | chr22:30562687 | -9,664 | -4,736 | -11,776 | — |
| chr22_30562593_C_G | chr22:30562593 | 9,648 | 3,392 | 9,728 | — |
| chr22_30562614_A_G | chr22:30562614 | 9,584 | 3,552 | 9,728 | — |
| chr22_30562698_T_A | chr22:30562698 | 9,464 | 4,672 | 6,464 | — |
| chr22_30562614_A_C | chr22:30562614 | -9,408 | -3,296 | -7,424 | — |
| chr22_30562706_T_C | chr22:30562706 | 9,320 | 4,352 | 6,016 | — |
| chr22_30562607_G_C | chr22:30562607 | -9,280 | -3,648 | -9,728 | — |
| chr22_30562637_G_A | chr22:30562637 | -9,256 | -3,584 | -9,344 | 2.0e-5 |
| chr22_30562714_C_G | chr22:30562714 | 9,216 | 4,480 | 6,784 | — |
| chr22_30562637_G_T | chr22:30562637 | -9,192 | -3,168 | -9,088 | — |
| chr22_30562738_C_T | chr22:30562738 | -9,176 | -4,000 | -7,104 | — |
| chr22_30562696_T_G | chr22:30562696 | -9,172 | -3,968 | -7,552 | — |
| chr22_30562598_T_G | chr22:30562598 | 8,816 | 3,264 | 12,928 | — |
| chr22_30562640_C_A | chr22:30562640 | -8,800 | -3,264 | -8,576 | — |
| chr22_30562664_G_A | chr22:30562664 | 8,784 | 2,624 | 8,064 | — |
| chr22_30562666_A_G | chr22:30562666 | -8,728 | -4,128 | -8,832 | — |
| chr22_30562638_A_G | chr22:30562638 | 8,728 | 3,264 | 8,320 | — |
| chr22_30562636_C_A | chr22:30562636 | 8,712 | 2,528 | 5,760 | — |
| chr22_30562660_T_A | chr22:30562660 | -8,592 | -3,584 | -7,296 | — |
| chr22_30562593_C_A | chr22:30562593 | 8,576 | 3,712 | 8,960 | — |
| chr22_30562609_C_A | chr22:30562609 | 8,368 | 2,944 | 6,400 | — |
| chr22_30562643_G_T | chr22:30562643 | -8,248 | -2,304 | -9,472 | — |
| chr22_30562716_G_C | chr22:30562716 | -8,248 | -3,152 | -5,952 | — |
| chr22_30562649_T_A | chr22:30562649 | -8,216 | -3,328 | -8,320 | — |
| chr22_30562739_A_C | chr22:30562739 | -8,144 | -3,712 | -6,336 | — |
| chr22_30562633_C_T | chr22:30562633 | 8,128 | 3,104 | 9,088 | — |
| chr22_30562675_C_G | chr22:30562675 | 8,088 | 3,840 | 4,096 | — |
| chr22_30562612_C_A | chr22:30562612 | 8,064 | 3,424 | 6,528 | — |
| chr22_30562643_G_A | chr22:30562643 | -8,040 | -2,560 | -8,704 | 3.9e-5 |
| chr22_30562605_A_C | chr22:30562605 | 8,016 | 2,912 | 5,632 | — |
| chr22_30562735_G_A | chr22:30562735 | -7,984 | -3,488 | -7,232 | — |
| chr22_30562646_A_C | chr22:30562646 | 7,952 | 3,264 | 8,832 | — |
| chr22_30562686_G_C | chr22:30562686 | -7,928 | -4,000 | -11,712 | — |
| chr22_30562646_A_T | chr22:30562646 | 7,840 | 2,080 | 8,192 | — |
| chr22_30562660_T_C | chr22:30562660 | -7,792 | -3,392 | -5,376 | 6.6e-6 |
| chr22_30562667_T_C | chr22:30562667 | -7,784 | -3,328 | -7,424 | — |
| chr22_30562680_C_A | chr22:30562680 | -7,680 | -3,952 | -8,320 | 1.3e-5 |
| chr22_30562678_G_C | chr22:30562678 | -7,648 | -3,584 | -5,760 | — |
| chr22_30635349_C_T | chr22:30635349 | -7,616 | -448 | -10,752 | — |
| chr22_30562608_C_A | chr22:30562608 | -7,600 | -3,232 | -6,272 | — |
| chr22_30562650_G_T | chr22:30562650 | -7,520 | -3,584 | -3,968 | — |
| chr22_30562650_G_A | chr22:30562650 | 7,512 | 1,920 | 6,016 | — |
| chr22_30562670_C_G | chr22:30562670 | -7,496 | -2,752 | -7,168 | — |
| chr22_30562663_T_A | chr22:30562663 | -7,464 | -3,424 | -9,600 | — |
| chr22_30562623_T_C | chr22:30562623 | -7,360 | -2,176 | -6,144 | — |
| chr22_30562658_T_C | chr22:30562658 | -7,360 | -2,880 | -4,224 | — |
| chr22_30562641_C_A | chr22:30562641 | -7,328 | -2,496 | -7,552 | — |
| chr22_30562596_G_A | chr22:30562596 | -7,328 | -2,720 | -6,400 | 3.9e-5 |
| chr22_30562635_C_A | chr22:30562635 | 7,312 | 3,360 | 6,016 | — |
| chr22_30562683_T_A | chr22:30562683 | 7,296 | 2,192 | 2,432 | — |
| chr22_30562642_T_A | chr22:30562642 | 7,168 | 3,392 | 3,328 | — |
| chr22_30562691_G_C | chr22:30562691 | 7,136 | 2,976 | 6,528 | — |
| chr22_30562595_C_G | chr22:30562595 | 7,088 | 2,336 | 6,400 | — |
| chr22_30562688_G_A | chr22:30562688 | -7,064 | -3,808 | -11,520 | — |
| chr22_30562676_A_G | chr22:30562676 | 7,024 | 3,360 | 5,760 | — |
| chr22_30562631_C_G | chr22:30562631 | -7,000 | -2,688 | -8,064 | — |
| chr22_30562601_A_C | chr22:30562601 | 6,960 | 1,920 | 5,504 | — |
| chr22_30562689_C_A | chr22:30562689 | -6,952 | -3,264 | -9,344 | — |
| chr22_30562629_A_C | chr22:30562629 | 6,656 | 2,880 | 7,168 | — |
| chr22_30562649_T_G | chr22:30562649 | 6,616 | 1,952 | 7,680 | — |
| chr22_30562657_G_C | chr22:30562657 | -6,384 | -2,720 | -8,320 | — |
| chr22_30562705_C_G | chr22:30562705 | -6,372 | -2,576 | -7,232 | — |
| chr22_30562665_A_G | chr22:30562665 | -5,896 | -2,496 | -7,168 | 6.6e-6 |
| chr22_30562661_G_C | chr22:30562661 | 5,768 | 1,216 | 9,472 | — |
| chr22_30562690_A_T | chr22:30562690 | -5,672 | -3,040 | -7,232 | — |
| chr22_30562589_A_G | chr22:30562589 | 5,600 | 2,528 | 7,808 | — |
| chr22_30562694_G_C | chr22:30562694 | 5,476 | 2,544 | 8,064 | — |
| chr22_30562689_C_T | chr22:30562689 | -5,048 | -2,384 | -7,040 | — |
| chr22_30635401_G_T | chr22:30635401 | -4,992 | -720 | -9,472 | — |
| chr22_30562768_A_T | chr22:30562768 | 4,864 | 2,816 | 9,472 | — |
| chr22_30562666_A_T | chr22:30562666 | -4,600 | -2,080 | -7,296 | — |
| chr22_30562685_A_T | chr22:30562685 | -4,512 | -2,384 | -7,296 | — |
| chr22_30635387_C_G | chr22:30635387 | 2,496 | 192 | 7,680 | — |
| chr22_30635383_G_C | chr22:30635383 | 2,048 | 240 | 7,424 | — |
| chr22_30635389_C_G | chr22:30635389 | 1,920 | 176 | 7,680 | — |
| chr22_30635388_C_G | chr22:30635388 | 1,280 | 176 | 8,448 | — |
| chr22_30562673_C_A | chr22:30562673 | -1,112 | -1,344 | -7,552 | — |
| chr22_30635397_T_G | chr22:30635397 | 960 | 400 | 8,448 | — |
| chr22_30635392_G_T | chr22:30635392 | 576 | -560 | -7,424 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.