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TERT
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TERT
chr5:1,153,147..1,395,068, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1174598_G_A | chr5:1174598 | -1.000 | -0.746 | -1.000 | <0.001% |
| chr5_1168252_A_C | chr5:1168252 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr5_1168331_G_C | chr5:1168331 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1168322_C_T | chr5:1168322 | -1.000 | -1.000 | -1.000 | 0.056% |
| chr5_1174594_T_C | chr5:1174594 | -1.000 | -0.652 | -1.000 | <0.001% |
| chr5_1167865_G_A | chr5:1167865 | -1.000 | -0.812 | -1.000 | 0.0039% |
| chr5_1167864_G_A | chr5:1167864 | -1.000 | -0.855 | -1.000 | 0.0013% |
| chr5_1167862_G_T | chr5:1167862 | -1.000 | -0.657 | -1.000 | <0.001% |
| chr5_1174538_T_A | chr5:1174538 | 1.000 | 0.305 | 1.000 | 0.0013% |
| chr5_1161343_A_T | chr5:1161343 | -0.369 | -0.613 | -1.000 | 0.079% |
| chr5_1174595_G_C | chr5:1174595 | -1.000 | -0.361 | -1.000 | 0.305% |
| chr5_1174520_T_C | chr5:1174520 | -0.977 | -0.208 | -1.000 | <0.001% |
| chr5_1162139_C_A | chr5:1162139 | -0.944 | -0.732 | -1.000 | <0.001% |
| chr5_1162040_G_C | chr5:1162040 | -0.930 | -0.888 | -1.000 | <0.001% |
| chr5_1167851_A_T | chr5:1167851 | -0.940 | -0.355 | -1.000 | <0.001% |
| chr5_1174518_A_G | chr5:1174518 | -0.938 | -0.252 | -1.000 | 0.448% |
| chr5_1161346_C_T | chr5:1161346 | -0.215 | -0.524 | -1.000 | 0.0013% |
| chr5_1174522_A_C | chr5:1174522 | -0.856 | -0.248 | -1.000 | <0.001% |
| chr5_1162129_T_C | chr5:1162129 | -0.852 | -0.642 | -1.000 | 0.0013% |
| chr5_1162121_C_T | chr5:1162121 | -0.831 | -0.685 | -1.000 | <0.001% |
| chr5_1181611_C_T | chr5:1181611 | 0.672 | 0.922 | 0.757 | — |
| chr5_1167947_C_G | chr5:1167947 | 0.210 | 0.089 | 1.000 | 0.0020% |
| chr5_1162105_G_A | chr5:1162105 | 0.767 | 0.543 | 0.810 | 0.0013% |
| chr5_1174520_T_A | chr5:1174520 | -0.738 | -0.174 | -1.000 | 0.041% |
| chr5_1162029_C_T | chr5:1162029 | -0.734 | -0.722 | -1.000 | 0.034% |
| chr5_1174614_G_C | chr5:1174614 | -0.715 | -0.168 | -0.791 | 0.0039% |
| chr5_1162109_C_A | chr5:1162109 | -0.711 | -0.530 | -1.000 | <0.001% |
| chr5_1167863_C_T | chr5:1167863 | 0.666 | 0.220 | 0.882 | <0.001% |
| chr5_1181608_G_C | chr5:1181608 | 0.391 | 0.549 | 0.934 | — |
| chr5_1162173_G_T | chr5:1162173 | -0.629 | -0.527 | -0.824 | 0.013% |
| chr5_1162037_C_T | chr5:1162037 | -0.619 | -0.522 | -0.765 | 0.0053% |
| chr5_1168336_G_A | chr5:1168336 | -0.614 | -0.129 | -0.503 | 0.0026% |
| chr5_1168235_C_T | chr5:1168235 | -0.563 | -0.313 | -0.967 | <0.001% |
| chr5_1162097_C_T | chr5:1162097 | 0.598 | 0.428 | 0.758 | 0.0026% |
| chr5_1168176_A_T | chr5:1168176 | 0.590 | 0.342 | 0.575 | 0.0033% |
| chr5_1168333_G_A | chr5:1168333 | -0.584 | -0.083 | -0.908 | <0.001% |
| chr5_1162124_G_C | chr5:1162124 | -0.577 | -0.276 | -0.458 | <0.001% |
| chr5_1174544_C_A | chr5:1174544 | -0.559 | -0.158 | -0.712 | <0.001% |
| chr5_1161369_A_C | chr5:1161369 | -0.262 | -0.307 | -0.882 | <0.001% |
| chr5_1181612_C_A | chr5:1181612 | 0.426 | 0.599 | 0.476 | — |
| chr5_1167911_G_T | chr5:1167911 | -0.503 | -0.265 | -0.725 | <0.001% |
| chr5_1162038_G_A | chr5:1162038 | 0.041 | 0.256 | 0.758 | 0.0013% |
| chr5_1168156_A_G | chr5:1168156 | 0.478 | 0.326 | 0.601 | 1.18% |
| chr5_1168243_C_T | chr5:1168243 | -0.478 | -0.304 | -0.601 | 0.0013% |
| chr5_1162100_C_T | chr5:1162100 | -0.470 | -0.304 | -0.660 | 0.0039% |
| chr5_1174572_C_T | chr5:1174572 | 0.468 | 0.043 | 0.366 | 0.0013% |
| chr5_1167951_A_G | chr5:1167951 | 0.371 | 0.275 | 0.732 | <0.001% |
| chr5_1167911_G_C | chr5:1167911 | -0.452 | -0.204 | -0.569 | 0.047% |
| chr5_1162142_G_C | chr5:1162142 | -0.330 | -0.331 | -0.673 | <0.001% |
| chr5_1181619_G_C | chr5:1181619 | 0.352 | 0.316 | 0.489 | — |
| chr5_1181608_G_A | chr5:1181608 | 0.349 | 0.408 | 0.556 | — |
| chr5_1162088_A_G | chr5:1162088 | -0.414 | -0.345 | -0.425 | <0.001% |
| chr5_1168259_C_T | chr5:1168259 | -0.196 | -0.141 | -0.654 | 0.011% |
| chr5_1162125_C_A | chr5:1162125 | 0.408 | 0.313 | 0.556 | 0.0067% |
| chr5_1168415_C_T | chr5:1168415 | 0.408 | 0.104 | 0.536 | 0.0020% |
| chr5_1162185_C_A | chr5:1162185 | 0.404 | 0.326 | 0.392 | <0.001% |
| chr5_1168414_G_A | chr5:1168414 | 0.404 | 0.107 | 0.464 | 0.0033% |
| chr5_1168334_C_A | chr5:1168334 | -0.394 | -0.062 | -0.621 | <0.001% |
| chr5_1181643_G_C | chr5:1181643 | 0.320 | 0.622 | 0.440 | — |
| chr5_1168260_G_A | chr5:1168260 | -0.254 | -0.220 | -0.608 | <0.001% |
| chr5_1155999_G_A | chr5:1155999 | 0.138 | 0.130 | 0.592 | 0.0020% |
| chr5_1161981_G_A | chr5:1161981 | 0.371 | 0.526 | 0.510 | 0.016% |
| chr5_1168213_C_T | chr5:1168213 | -0.369 | -0.214 | -0.307 | 0.0026% |
| chr5_1181612_C_G | chr5:1181612 | 0.297 | 0.382 | 0.354 | — |
| chr5_1161989_C_T | chr5:1161989 | 0.355 | 0.305 | 0.444 | 0.014% |
| chr5_1162167_G_T | chr5:1162167 | -0.353 | -0.312 | -0.529 | <0.001% |
| chr5_1168285_T_G | chr5:1168285 | -0.299 | -0.070 | -0.556 | <0.001% |
| chr5_1174494_G_T | chr5:1174494 | -0.231 | 0.030 | -0.542 | <0.001% |
| chr5_1174494_G_A | chr5:1174494 | -0.202 | 0.027 | -0.536 | 0.0079% |
| chr5_1167945_A_C | chr5:1167945 | -0.336 | -0.070 | 0.039 | <0.001% |
| chr5_1167941_G_A | chr5:1167941 | -0.097 | -0.160 | -0.529 | 0.0039% |
| chr5_1168268_A_G | chr5:1168268 | 0.167 | 0.003 | 0.529 | <0.001% |
| chr5_1174564_A_G | chr5:1174564 | -0.330 | -0.070 | -0.255 | <0.001% |
| chr5_1181619_G_A | chr5:1181619 | 0.274 | 0.292 | 0.269 | — |
| chr5_1181617_T_C | chr5:1181617 | 0.272 | 0.301 | 0.415 | — |
| chr5_1168197_C_A | chr5:1168197 | -0.165 | -0.134 | -0.516 | 0.0013% |
| chr5_1181607_G_T | chr5:1181607 | 0.263 | 0.347 | 0.403 | — |
| chr5_1181605_C_G | chr5:1181605 | -0.241 | -0.251 | -0.464 | — |
| chr5_1162008_A_C | chr5:1162008 | -0.307 | -0.222 | -0.209 | 0.0059% |
| chr5_1181609_G_C | chr5:1181609 | 0.255 | 0.195 | 0.348 | — |
| chr5_1168143_G_C | chr5:1168143 | 0.082 | 0.163 | 0.484 | <0.001% |
| chr5_1181606_A_C | chr5:1181606 | -0.136 | -0.214 | -0.452 | — |
| chr5_1181642_A_G | chr5:1181642 | 0.251 | 0.269 | 0.208 | — |
| chr5_1162101_G_A | chr5:1162101 | 0.299 | 0.278 | 0.418 | 0.0020% |
| chr5_1174670_T_C | chr5:1174670 | -0.299 | -0.034 | -0.163 | 0.0013% |
| chr5_1161324_C_T | chr5:1161324 | -0.140 | -0.160 | -0.464 | 0.011% |
| chr5_1162122_C_T | chr5:1162122 | -0.227 | -0.123 | -0.464 | 0.0027% |
| chr5_1181606_A_T | chr5:1181606 | -0.134 | -0.178 | -0.434 | — |
| chr5_1174534_C_A | chr5:1174534 | -0.289 | -0.064 | -0.366 | 0.0026% |
| chr5_1167841_A_T | chr5:1167841 | -0.285 | -0.083 | -0.248 | <0.001% |
| chr5_1174601_C_G | chr5:1174601 | -0.282 | -0.051 | -0.261 | <0.001% |
| chr5_1181605_C_T | chr5:1181605 | -0.210 | -0.239 | -0.415 | — |
| chr5_1181606_A_G | chr5:1181606 | -0.160 | -0.201 | -0.415 | 1.18% |
| chr5_1181629_T_A | chr5:1181629 | 0.232 | 0.206 | 0.269 | — |
| chr5_1168415_C_G | chr5:1168415 | 0.278 | 0.128 | 0.255 | 0.0013% |
| chr5_1174507_T_C | chr5:1174507 | 0.278 | 0.097 | 0.170 | <0.001% |
| chr5_1174545_G_A | chr5:1174545 | 0.278 | 0.042 | 0.183 | <0.001% |
| chr5_1162093_C_T | chr5:1162093 | 0.204 | 0.228 | 0.438 | <0.001% |
| chr5_1161976_T_G | chr5:1161976 | 0.274 | 0.388 | 0.405 | 0.0013% |
| chr5_1174545_G_T | chr5:1174545 | 0.274 | 0.016 | 0.222 | 0.0013% |
| chr5_1168416_G_T | chr5:1168416 | 0.272 | 0.046 | 0.163 | <0.001% |
| chr5_1174431_T_C | chr5:1174431 | -0.249 | -0.105 | -0.431 | <0.001% |
| chr5_1174534_C_T | chr5:1174534 | -0.270 | -0.046 | -0.359 | 0.0072% |
| chr5_1162154_C_T | chr5:1162154 | 0.268 | 0.166 | 0.412 | 0.0020% |
| chr5_1155218_G_C | chr5:1155218 | 0.014 | 0.034 | 0.422 | <0.001% |
| chr5_1161349_C_T | chr5:1161349 | -0.027 | -0.085 | -0.418 | 0.0072% |
| chr5_1161555_A_C | chr5:1161555 | 0.029 | 0.061 | 0.418 | <0.001% |
| chr5_1162013_G_A | chr5:1162013 | -0.262 | -0.216 | -0.288 | 0.033% |
| chr5_1161335_T_A | chr5:1161335 | -0.258 | -0.430 | -0.379 | <0.001% |
| chr5_1181624_G_A | chr5:1181624 | 0.214 | 0.422 | 0.379 | — |
| chr5_1161349_C_A | chr5:1161349 | -0.021 | -0.054 | -0.405 | 0.0020% |
| chr5_1161960_C_T | chr5:1161960 | -0.245 | -0.281 | -0.405 | 0.0046% |
| chr5_1168253_A_T | chr5:1168253 | 0.254 | -0.051 | -0.131 | <0.001% |
| chr5_1181641_C_G | chr5:1181641 | 0.209 | 0.261 | 0.232 | — |
| chr5_1155945_G_A | chr5:1155945 | 0.057 | 0.123 | 0.398 | <0.001% |
| chr5_1162058_G_A | chr5:1162058 | -0.227 | -0.292 | -0.392 | 0.0013% |
| chr5_1162098_G_A | chr5:1162098 | 0.247 | 0.163 | 0.248 | 0.024% |
| chr5_1161311_C_T | chr5:1161311 | 0.000 | 0.246 | 0.379 | 0.269% |
| chr5_1161316_C_A | chr5:1161316 | 0.101 | 0.021 | -0.379 | 0.0046% |
| chr5_1167909_G_A | chr5:1167909 | -0.239 | -0.077 | -0.275 | <0.001% |
| chr5_1181607_G_C | chr5:1181607 | 0.198 | 0.222 | 0.293 | — |
| chr5_1161192_G_A | chr5:1161192 | 0.106 | 0.206 | 0.373 | 0.0085% |
| chr5_1181622_T_G | chr5:1181622 | 0.195 | 0.275 | 0.232 | — |
| chr5_1161197_G_A | chr5:1161197 | 0.119 | 0.203 | 0.366 | 0.033% |
| chr5_1161981_G_T | chr5:1161981 | 0.163 | 0.201 | 0.366 | 0.0026% |
| chr5_1168413_C_T | chr5:1168413 | 0.225 | 0.089 | 0.176 | 0.0039% |
| chr5_1174528_T_C | chr5:1174528 | 0.225 | 0.035 | 0.255 | 0.0013% |
| chr5_1162104_G_A | chr5:1162104 | 0.221 | 0.204 | 0.314 | <0.001% |
| chr5_1174459_G_C | chr5:1174459 | -0.221 | -0.069 | -0.301 | <0.001% |
| chr5_1162063_G_C | chr5:1162063 | -0.219 | -0.289 | -0.261 | 0.591% |
| chr5_1174479_A_G | chr5:1174479 | -0.219 | -0.059 | 0.261 | 0.0026% |
| chr5_1168177_T_C | chr5:1168177 | 0.216 | 0.121 | 0.131 | <0.001% |
| chr5_1174614_G_A | chr5:1174614 | -0.216 | -0.046 | -0.235 | 0.0026% |
| chr5_1181628_C_G | chr5:1181628 | 0.179 | 0.168 | 0.208 | — |
| chr5_1161393_C_G | chr5:1161393 | 0.080 | 0.134 | 0.340 | 0.0079% |
| chr5_1167942_T_C | chr5:1167942 | -0.214 | -0.086 | -0.026 | 0.0013% |
| chr5_1168130_G_A | chr5:1168130 | -0.124 | -0.089 | -0.340 | <0.001% |
| chr5_1162167_G_C | chr5:1162167 | -0.212 | -0.165 | -0.235 | <0.001% |
| chr5_1168337_C_G | chr5:1168337 | -0.212 | -0.032 | -0.176 | <0.001% |
| chr5_1155342_C_A | chr5:1155342 | 0.028 | 0.080 | 0.332 | 0.0013% |
| chr5_1161382_T_C | chr5:1161382 | -0.066 | -0.252 | -0.327 | 0.0020% |
| chr5_1162052_G_A | chr5:1162052 | -0.206 | -0.179 | -0.288 | 0.0072% |
| chr5_1168197_C_T | chr5:1168197 | -0.105 | -0.061 | -0.327 | 0.0013% |
| chr5_1161302_C_A | chr5:1161302 | 0.204 | -0.059 | 0.105 | <0.001% |
| chr5_1161779_G_T | chr5:1161779 | 0.204 | 0.088 | 0.111 | 0.0013% |
| chr5_1161196_C_T | chr5:1161196 | 0.045 | 0.211 | 0.320 | 0.0066% |
| chr5_1155221_C_T | chr5:1155221 | 0.044 | 0.062 | 0.314 | <0.001% |
| chr5_1167821_C_T | chr5:1167821 | -0.198 | -0.113 | -0.229 | 0.0053% |
| chr5_1168220_T_A | chr5:1168220 | -0.060 | -0.061 | -0.314 | 0.0013% |
| chr5_1168236_G_A | chr5:1168236 | -0.080 | -0.073 | -0.314 | 0.0013% |
| chr5_1181610_T_G | chr5:1181610 | 0.152 | 0.221 | 0.293 | — |
| chr5_1167817_C_A | chr5:1167817 | -0.196 | -0.117 | -0.222 | 0.0039% |
| chr5_1161199_A_G | chr5:1161199 | 0.086 | 0.171 | 0.307 | <0.001% |
| chr5_1161370_C_A | chr5:1161370 | -0.074 | -0.104 | -0.307 | <0.001% |
| chr5_1156232_C_T | chr5:1156232 | 0.039 | 0.069 | 0.304 | <0.001% |
| chr5_1161371_C_G | chr5:1161371 | 0.109 | 0.062 | 0.301 | 0.0046% |
| chr5_1168136_A_G | chr5:1168136 | 0.099 | 0.070 | 0.301 | <0.001% |
| chr5_1167883_C_T | chr5:1167883 | -0.146 | -0.064 | -0.294 | 0.0020% |
| chr5_1168350_T_A | chr5:1168350 | -0.184 | -0.035 | -0.046 | 0.012% |
| chr5_1161253_G_A | chr5:1161253 | -0.034 | -0.069 | -0.288 | 0.0013% |
| chr5_1167999_G_C | chr5:1167999 | -0.072 | -0.086 | -0.288 | <0.001% |
| chr5_1168261_G_A | chr5:1168261 | -0.181 | -0.105 | -0.229 | <0.001% |
| chr5_1168266_G_C | chr5:1168266 | 0.181 | 0.006 | -0.216 | <0.001% |
| chr5_1155220_C_T | chr5:1155220 | 0.050 | 0.052 | 0.284 | 0.0020% |
| chr5_1168416_G_A | chr5:1168416 | 0.179 | 0.034 | 0.098 | 0.0053% |
| chr5_1174334_C_T | chr5:1174334 | 0.179 | 0.105 | 0.085 | 0.0046% |
| chr5_1155600_C_T | chr5:1155600 | 0.049 | 0.060 | 0.281 | 0.0020% |
| chr5_1161642_A_C | chr5:1161642 | 0.089 | -0.006 | 0.281 | 0.0099% |
| chr5_1168302_G_A | chr5:1168302 | -0.165 | -0.112 | -0.281 | 0.0013% |
| chr5_1174584_G_C | chr5:1174584 | -0.177 | -0.034 | -0.137 | <0.001% |
| chr5_1174655_C_T | chr5:1174655 | -0.175 | -0.053 | -0.170 | 0.0013% |
| chr5_1161549_C_G | chr5:1161549 | 0.068 | 0.014 | 0.275 | <0.001% |
| chr5_1168424_C_G | chr5:1168424 | 0.173 | 0.083 | 0.222 | <0.001% |
| chr5_1181642_A_C | chr5:1181642 | 0.144 | 0.158 | 0.122 | — |
| chr5_1181642_A_T | chr5:1181642 | 0.144 | 0.139 | 0.110 | — |
| chr5_1155914_C_G | chr5:1155914 | -0.088 | -0.046 | -0.273 | <0.001% |
| chr5_1168415_C_A | chr5:1168415 | 0.171 | 0.064 | 0.092 | 0.196% |
| chr5_1168190_C_T | chr5:1168190 | -0.169 | -0.086 | -0.235 | 0.012% |
| chr5_1155928_C_T | chr5:1155928 | -0.107 | -0.070 | -0.267 | 0.0014% |
| chr5_1162070_G_C | chr5:1162070 | 0.167 | 0.142 | 0.039 | 0.0020% |
| chr5_1162073_G_A | chr5:1162073 | -0.167 | -0.086 | -0.222 | <0.001% |
| chr5_1162220_C_T | chr5:1162220 | 0.167 | 0.078 | 0.072 | 0.0033% |
| chr5_1168004_G_C | chr5:1168004 | -0.167 | -0.086 | -0.144 | <0.001% |
| chr5_1155350_C_G | chr5:1155350 | 0.073 | 0.134 | 0.263 | <0.001% |
| chr5_1167828_A_G | chr5:1167828 | 0.165 | 0.072 | 0.124 | <0.001% |
| chr5_1168146_C_G | chr5:1168146 | 0.136 | 0.093 | 0.261 | 0.0020% |
| chr5_1168266_G_A | chr5:1168266 | 0.109 | -0.070 | -0.261 | 0.0013% |
| chr5_1181605_C_A | chr5:1181605 | -0.133 | -0.134 | -0.244 | — |
| chr5_1162165_G_A | chr5:1162165 | 0.161 | 0.136 | 0.150 | 0.0020% |
| chr5_1167804_G_A | chr5:1167804 | -0.047 | -0.010 | -0.255 | 0.0079% |
| chr5_1167825_C_A | chr5:1167825 | -0.128 | -0.139 | -0.255 | <0.001% |
| chr5_1181609_G_A | chr5:1181609 | 0.133 | 0.053 | 0.116 | — |
| chr5_1161332_A_G | chr5:1161332 | -0.159 | -0.296 | 0.131 | <0.001% |
| chr5_1168375_A_G | chr5:1168375 | 0.159 | 0.040 | 0.137 | <0.001% |
| chr5_1161315_G_A | chr5:1161315 | 0.006 | -0.042 | -0.248 | 0.022% |
| chr5_1162051_C_T | chr5:1162051 | 0.155 | 0.176 | 0.248 | 0.0085% |
| chr5_1167883_C_G | chr5:1167883 | -0.109 | -0.029 | -0.248 | 0.0013% |
| chr5_1174303_C_G | chr5:1174303 | -0.004 | 0.003 | 0.248 | 0.012% |
| chr5_1174493_C_T | chr5:1174493 | 0.004 | -0.006 | -0.248 | 0.0026% |
| chr5_1181609_G_T | chr5:1181609 | 0.130 | 0.079 | 0.165 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.