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TLR1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TLR1
chr4:38,696,254..38,904,791, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_38787799_A_T | chr4:38787799 | 1.000 | 1.000 | 0.776 | — |
| chr4_38787795_A_G | chr4:38787795 | 1.000 | 1.000 | 0.739 | — |
| chr4_38787786_C_A | chr4:38787786 | 1.000 | 1.000 | 0.650 | — |
| chr4_38787797_A_C | chr4:38787797 | -1.000 | -1.000 | -0.928 | — |
| chr4_38787789_T_G | chr4:38787789 | 1.000 | 1.000 | 0.617 | — |
| chr4_38787797_A_T | chr4:38787797 | -1.000 | -1.000 | -0.937 | — |
| chr4_38787797_A_G | chr4:38787797 | -1.000 | -1.000 | -0.843 | — |
| chr4_38787764_A_T | chr4:38787764 | 0.946 | 1.000 | 0.742 | — |
| chr4_38787788_A_G | chr4:38787788 | 0.903 | 1.000 | 0.504 | — |
| chr4_38787798_A_G | chr4:38787798 | -0.901 | -1.000 | -0.763 | — |
| chr4_38787798_A_T | chr4:38787798 | -0.893 | -1.000 | -0.776 | — |
| chr4_38787787_C_G | chr4:38787787 | 0.892 | 1.000 | 0.571 | — |
| chr4_38787786_C_G | chr4:38787786 | 0.871 | 0.958 | 0.470 | — |
| chr4_38787786_C_T | chr4:38787786 | 0.847 | 0.496 | 0.269 | — |
| chr4_38787787_C_A | chr4:38787787 | 0.842 | 0.935 | 0.443 | — |
| chr4_38787796_C_A | chr4:38787796 | -0.820 | -0.855 | -0.666 | — |
| chr4_38787796_C_G | chr4:38787796 | -0.819 | -0.914 | -0.681 | — |
| chr4_38787788_A_C | chr4:38787788 | 0.811 | 0.964 | 0.406 | — |
| chr4_38787800_C_A | chr4:38787800 | -0.776 | -0.873 | -0.641 | — |
| chr4_38787800_C_G | chr4:38787800 | -0.774 | -0.951 | -0.656 | — |
| chr4_38787782_G_A | chr4:38787782 | 0.770 | 0.719 | 0.473 | — |
| chr4_38787793_A_C | chr4:38787793 | -0.768 | -0.855 | -0.598 | — |
| chr4_38787795_A_C | chr4:38787795 | -0.768 | -0.795 | -0.617 | — |
| chr4_38787781_G_C | chr4:38787781 | 0.763 | 0.821 | 0.452 | — |
| chr4_38787799_A_C | chr4:38787799 | 0.740 | 0.756 | 0.437 | — |
| chr4_38787798_A_C | chr4:38787798 | -0.703 | -0.940 | -0.580 | — |
| chr4_38787789_T_C | chr4:38787789 | 0.682 | 0.706 | 0.388 | — |
| chr4_38787788_A_T | chr4:38787788 | 0.632 | 0.771 | 0.382 | — |
| chr4_38787800_C_T | chr4:38787800 | -0.621 | -0.712 | -0.547 | 0.117% |
| chr4_38787761_C_T | chr4:38787761 | -0.596 | -0.597 | -0.455 | — |
| chr4_38787781_G_T | chr4:38787781 | 0.596 | 0.701 | 0.369 | — |
| chr4_38787792_T_A | chr4:38787792 | -0.577 | -0.732 | -0.458 | — |
| chr4_38787783_C_T | chr4:38787783 | 0.569 | 0.545 | 0.305 | — |
| chr4_38787795_A_T | chr4:38787795 | -0.560 | -0.683 | -0.501 | — |
| chr4_38787785_A_C | chr4:38787785 | 0.543 | 0.629 | 0.360 | — |
| chr4_38787792_T_G | chr4:38787792 | -0.518 | -0.634 | -0.376 | — |
| chr4_38787789_T_A | chr4:38787789 | 0.501 | 0.655 | 0.284 | — |
| chr4_38787792_T_C | chr4:38787792 | -0.485 | -0.616 | -0.382 | — |
| chr4_38787782_G_C | chr4:38787782 | 0.474 | 0.527 | 0.229 | — |
| chr4_38787755_G_A | chr4:38787755 | 0.469 | 0.483 | 0.195 | — |
| chr4_38787794_C_G | chr4:38787794 | -0.466 | -0.564 | -0.351 | — |
| chr4_38787759_T_C | chr4:38787759 | -0.459 | -0.494 | -0.327 | — |
| chr4_38787787_C_T | chr4:38787787 | 0.457 | 0.499 | 0.202 | — |
| chr4_38787773_C_T | chr4:38787773 | -0.456 | -0.512 | -0.342 | 0.0020% |
| chr4_38787769_C_A | chr4:38787769 | 0.453 | 0.590 | 0.357 | — |
| chr4_38787781_G_A | chr4:38787781 | 0.451 | 0.506 | 0.244 | — |
| chr4_38787775_G_T | chr4:38787775 | -0.448 | -0.561 | -0.385 | — |
| chr4_38787772_A_C | chr4:38787772 | 0.418 | 0.322 | 0.366 | — |
| chr4_38787790_A_T | chr4:38787790 | -0.415 | -0.486 | -0.269 | — |
| chr4_38787791_T_G | chr4:38787791 | 0.404 | 0.527 | 0.198 | — |
| chr4_38787768_A_C | chr4:38787768 | -0.397 | -0.491 | -0.311 | — |
| chr4_38787763_T_A | chr4:38787763 | 0.372 | 0.434 | 0.305 | — |
| chr4_38787794_C_T | chr4:38787794 | -0.352 | -0.457 | -0.318 | 0.0013% |
| chr4_38787749_T_G | chr4:38787749 | 0.345 | 0.229 | 0.208 | — |
| chr4_38787801_A_G | chr4:38787801 | -0.341 | -0.345 | -0.235 | — |
| chr4_38787782_G_T | chr4:38787782 | 0.337 | 0.457 | 0.162 | <0.001% |
| chr4_38787763_T_C | chr4:38787763 | 0.328 | 0.322 | 0.266 | — |
| chr4_38787763_T_G | chr4:38787763 | 0.323 | 0.340 | 0.247 | — |
| chr4_38787790_A_G | chr4:38787790 | 0.321 | 0.377 | 0.186 | — |
| chr4_38787766_C_T | chr4:38787766 | -0.318 | -0.377 | -0.269 | — |
| chr4_38787791_T_A | chr4:38787791 | -0.309 | -0.327 | -0.263 | — |
| chr4_38787784_T_A | chr4:38787784 | 0.308 | 0.291 | 0.241 | — |
| chr4_38787783_C_G | chr4:38787783 | -0.297 | -0.338 | -0.302 | — |
| chr4_38787802_G_T | chr4:38787802 | -0.294 | -0.439 | -0.238 | — |
| chr4_38787767_C_T | chr4:38787767 | -0.292 | -0.330 | -0.229 | — |
| chr4_38787755_G_T | chr4:38787755 | -0.291 | -0.205 | -0.186 | — |
| chr4_38787774_G_C | chr4:38787774 | 0.287 | 0.239 | 0.113 | — |
| chr4_38787769_C_T | chr4:38787769 | 0.285 | 0.203 | 0.189 | — |
| chr4_38787748_T_G | chr4:38787748 | 0.279 | 0.192 | 0.272 | — |
| chr4_38787775_G_A | chr4:38787775 | -0.279 | -0.319 | -0.266 | — |
| chr4_38787802_G_A | chr4:38787802 | -0.275 | -0.364 | -0.214 | 0.0026% |
| chr4_38787771_T_C | chr4:38787771 | 0.274 | 0.301 | 0.202 | <0.001% |
| chr4_38787757_A_C | chr4:38787757 | -0.272 | -0.171 | -0.073 | — |
| chr4_38787801_A_T | chr4:38787801 | 0.272 | 0.343 | 0.162 | — |
| chr4_38787758_T_A | chr4:38787758 | -0.271 | -0.218 | -0.162 | — |
| chr4_38787766_C_G | chr4:38787766 | -0.261 | -0.309 | -0.208 | — |
| chr4_38787758_T_C | chr4:38787758 | -0.256 | -0.229 | -0.144 | — |
| chr4_38787791_T_C | chr4:38787791 | -0.255 | -0.327 | -0.238 | 0.0026% |
| chr4_38787765_G_T | chr4:38787765 | -0.247 | -0.179 | -0.180 | — |
| chr4_38787783_C_A | chr4:38787783 | 0.245 | 0.195 | 0.085 | — |
| chr4_38787753_A_C | chr4:38787753 | 0.240 | 0.166 | 0.110 | — |
| chr4_38787756_C_G | chr4:38787756 | -0.238 | -0.151 | -0.104 | — |
| chr4_38787784_T_C | chr4:38787784 | -0.229 | -0.286 | -0.165 | — |
| chr4_38787770_A_G | chr4:38787770 | 0.226 | 0.278 | 0.244 | — |
| chr4_38787779_G_T | chr4:38787779 | 0.220 | 0.265 | 0.140 | — |
| chr4_38787756_C_T | chr4:38787756 | -0.215 | -0.151 | -0.137 | — |
| chr4_38787758_T_G | chr4:38787758 | -0.215 | -0.148 | -0.095 | — |
| chr4_38787769_C_G | chr4:38787769 | 0.215 | 0.281 | 0.140 | — |
| chr4_38787768_A_T | chr4:38787768 | -0.214 | -0.252 | -0.140 | — |
| chr4_38787771_T_G | chr4:38787771 | 0.213 | 0.187 | 0.125 | <0.001% |
| chr4_38787802_G_C | chr4:38787802 | -0.210 | -0.317 | -0.131 | — |
| chr4_38787767_C_G | chr4:38787767 | -0.207 | -0.260 | -0.101 | — |
| chr4_38787748_T_C | chr4:38787748 | 0.206 | 0.148 | 0.134 | <0.001% |
| chr4_38787759_T_A | chr4:38787759 | -0.202 | -0.153 | -0.119 | — |
| chr4_38787785_A_G | chr4:38787785 | -0.201 | -0.278 | -0.046 | — |
| chr4_38787754_A_T | chr4:38787754 | -0.197 | -0.229 | -0.171 | — |
| chr4_38787780_T_G | chr4:38787780 | -0.195 | -0.094 | -0.119 | — |
| chr4_38787752_C_T | chr4:38787752 | -0.194 | -0.148 | -0.107 | — |
| chr4_38787760_C_A | chr4:38787760 | -0.194 | -0.094 | -0.073 | — |
| chr4_38787785_A_T | chr4:38787785 | 0.191 | 0.286 | 0.162 | — |
| chr4_38787773_C_G | chr4:38787773 | -0.187 | -0.179 | -0.150 | — |
| chr4_38787793_A_T | chr4:38787793 | -0.183 | -0.119 | -0.104 | — |
| chr4_38787755_G_C | chr4:38787755 | -0.182 | -0.065 | -0.070 | — |
| chr4_38787754_A_C | chr4:38787754 | -0.173 | -0.252 | -0.113 | — |
| chr4_38787784_T_G | chr4:38787784 | 0.173 | 0.203 | 0.140 | — |
| chr4_38787799_A_G | chr4:38787799 | 0.172 | 0.166 | 0.128 | 0.0039% |
| chr4_38787751_T_C | chr4:38787751 | 0.169 | 0.135 | 0.089 | — |
| chr4_38787762_A_T | chr4:38787762 | -0.166 | -0.197 | -0.079 | — |
| chr4_38787748_T_A | chr4:38787748 | 0.164 | -0.070 | 0.009 | — |
| chr4_38787760_C_G | chr4:38787760 | -0.163 | -0.052 | 0.000 | — |
| chr4_38787774_G_A | chr4:38787774 | -0.163 | -0.182 | -0.150 | 0.0013% |
| chr4_38787778_A_T | chr4:38787778 | -0.157 | -0.275 | -0.089 | — |
| chr4_38787779_G_C | chr4:38787779 | 0.151 | 0.156 | 0.092 | — |
| chr4_38787776_C_A | chr4:38787776 | -0.150 | -0.109 | -0.150 | — |
| chr4_38787761_C_G | chr4:38787761 | -0.146 | -0.052 | -0.043 | — |
| chr4_38787780_T_A | chr4:38787780 | 0.144 | 0.218 | 0.122 | — |
| chr4_38787762_A_C | chr4:38787762 | -0.141 | -0.083 | -0.018 | — |
| chr4_38787767_C_A | chr4:38787767 | -0.139 | -0.161 | -0.064 | — |
| chr4_38787777_T_C | chr4:38787777 | 0.134 | 0.151 | 0.134 | — |
| chr4_38787757_A_T | chr4:38787757 | -0.132 | 0.023 | 0.006 | — |
| chr4_38787756_C_A | chr4:38787756 | -0.128 | -0.078 | -0.070 | — |
| chr4_38787753_A_G | chr4:38787753 | -0.126 | -0.101 | -0.061 | — |
| chr4_38787760_C_T | chr4:38787760 | -0.120 | -0.010 | 0.015 | — |
| chr4_38787757_A_G | chr4:38787757 | -0.118 | -0.034 | 0.031 | — |
| chr4_38787771_T_A | chr4:38787771 | 0.109 | 0.112 | 0.128 | — |
| chr4_38787750_T_C | chr4:38787750 | -0.093 | -0.314 | -0.092 | — |
| chr4_38787778_A_C | chr4:38787778 | 0.103 | 0.044 | 0.128 | — |
| chr4_38787750_T_A | chr4:38787750 | 0.103 | -0.055 | 0.009 | — |
| chr4_38787765_G_C | chr4:38787765 | -0.098 | -0.075 | -0.092 | — |
| chr4_38787803_G_T | chr4:38787803 | 0.095 | 0.016 | 0.024 | — |
| chr4_38787761_C_A | chr4:38787761 | -0.092 | 0.005 | -0.037 | — |
| chr4_38787773_C_A | chr4:38787773 | -0.089 | -0.099 | -0.110 | — |
| chr4_38787766_C_A | chr4:38787766 | -0.087 | -0.060 | -0.107 | — |
| chr4_38787759_T_G | chr4:38787759 | -0.086 | -0.062 | 0.018 | — |
| chr4_38787804_A_C | chr4:38787804 | 0.017 | 0.132 | 0.153 | — |
| chr4_38787772_A_T | chr4:38787772 | -0.079 | -0.096 | -0.034 | — |
| chr4_38750372_A_C | chr4:38750372 | 0.003 | 0.038 | 0.140 | — |
| chr4_38787764_A_C | chr4:38787764 | -0.079 | -0.068 | -0.012 | — |
| chr4_38787753_A_T | chr4:38787753 | -0.076 | -0.042 | -0.058 | — |
| chr4_38750370_A_G | chr4:38750370 | -0.002 | 0.023 | 0.134 | — |
| chr4_38787776_C_T | chr4:38787776 | -0.073 | -0.042 | -0.079 | — |
| chr4_38787776_C_G | chr4:38787776 | 0.071 | 0.114 | 0.012 | — |
| chr4_38750369_T_C | chr4:38750369 | 0.003 | 0.027 | 0.125 | — |
| chr4_38750364_A_G | chr4:38750364 | -0.003 | 0.026 | 0.122 | — |
| chr4_38750366_A_C | chr4:38750366 | 0.003 | 0.021 | 0.119 | — |
| chr4_38750370_A_C | chr4:38750370 | -0.001 | 0.022 | 0.119 | — |
| chr4_38750372_A_G | chr4:38750372 | 0.003 | 0.038 | 0.119 | — |
| chr4_38750371_T_C | chr4:38750371 | 0.001 | 0.021 | 0.116 | — |
| chr4_38750375_T_C | chr4:38750375 | 0.004 | 0.018 | 0.116 | <0.001% |
| chr4_38750365_T_C | chr4:38750365 | 0.003 | 0.019 | 0.113 | — |
| chr4_38750374_A_C | chr4:38750374 | -0.001 | 0.019 | 0.113 | — |
| chr4_38787794_C_A | chr4:38787794 | 0.062 | 0.021 | 0.021 | — |
| chr4_38787754_A_G | chr4:38787754 | -0.061 | -0.104 | -0.043 | — |
| chr4_38750363_T_G | chr4:38750363 | 0.003 | 0.019 | 0.107 | — |
| chr4_38750382_G_A | chr4:38750382 | -0.008 | -0.017 | -0.107 | <0.001% |
| chr4_38787751_T_G | chr4:38787751 | 0.059 | 0.052 | 0.052 | — |
| chr4_38750366_A_G | chr4:38750366 | 0.000 | 0.017 | 0.104 | — |
| chr4_38750373_A_C | chr4:38750373 | 0.005 | 0.026 | 0.104 | — |
| chr4_38750360_A_G | chr4:38750360 | 0.000 | 0.014 | 0.098 | — |
| chr4_38750364_A_C | chr4:38750364 | -0.008 | 0.021 | 0.098 | — |
| chr4_38750367_A_C | chr4:38750367 | 0.009 | 0.019 | 0.098 | <0.001% |
| chr4_38750369_T_G | chr4:38750369 | -0.001 | 0.014 | 0.098 | — |
| chr4_38750365_T_G | chr4:38750365 | -0.004 | 0.013 | 0.095 | — |
| chr4_38750368_A_G | chr4:38750368 | 0.003 | 0.017 | 0.095 | — |
| chr4_38787751_T_A | chr4:38787751 | -0.053 | -0.145 | -0.061 | — |
| chr4_38787775_G_C | chr4:38787775 | -0.048 | -0.125 | -0.095 | — |
| chr4_38787765_G_A | chr4:38787765 | -0.052 | -0.070 | -0.076 | — |
| chr4_38750368_A_C | chr4:38750368 | -0.003 | 0.016 | 0.092 | — |
| chr4_38750374_A_G | chr4:38750374 | 0.003 | 0.016 | 0.092 | — |
| chr4_38750376_A_G | chr4:38750376 | -0.006 | 0.018 | 0.092 | — |
| chr4_38750363_T_C | chr4:38750363 | 0.006 | 0.016 | 0.089 | — |
| chr4_38750376_A_C | chr4:38750376 | -0.006 | 0.013 | 0.089 | — |
| chr4_38787790_A_C | chr4:38787790 | -0.050 | -0.112 | -0.076 | — |
| chr4_38750371_T_G | chr4:38750371 | -0.007 | 0.017 | 0.085 | — |
| chr4_38787764_A_G | chr4:38787764 | 0.004 | 0.088 | 0.085 | — |
| chr4_38750362_T_G | chr4:38750362 | 0.004 | 0.013 | 0.082 | — |
| chr4_38787752_C_G | chr4:38787752 | 0.046 | 0.099 | 0.046 | — |
| chr4_38750359_T_C | chr4:38750359 | 0.000 | 0.008 | 0.079 | — |
| chr4_38750382_G_T | chr4:38750382 | -0.005 | -0.008 | -0.076 | — |
| chr4_38787772_A_G | chr4:38787772 | 0.015 | -0.018 | 0.076 | — |
| chr4_38787749_T_A | chr4:38787749 | 0.042 | -0.029 | -0.015 | — |
| chr4_38749468_T_C | chr4:38749468 | -0.041 | 0.029 | 0.018 | — |
| chr4_38750361_T_G | chr4:38750361 | 0.000 | 0.008 | 0.073 | — |
| chr4_38750373_A_G | chr4:38750373 | -0.001 | 0.012 | 0.073 | — |
| chr4_38750375_T_G | chr4:38750375 | -0.002 | 0.010 | 0.073 | — |
| chr4_38750444_T_A | chr4:38750444 | 0.041 | 0.021 | 0.021 | — |
| chr4_38787749_T_C | chr4:38787749 | 0.040 | -0.094 | -0.027 | — |
| chr4_38787777_T_G | chr4:38787777 | 0.040 | -0.106 | -0.006 | — |
| chr4_38749469_A_T | chr4:38749469 | -0.039 | 0.005 | -0.018 | — |
| chr4_38750381_T_G | chr4:38750381 | -0.011 | 0.001 | 0.070 | — |
| chr4_38787747_C_A | chr4:38787747 | 0.019 | 0.117 | -0.015 | — |
| chr4_38750359_T_G | chr4:38750359 | -0.001 | 0.005 | 0.067 | — |
| chr4_38750360_A_C | chr4:38750360 | -0.006 | 0.004 | 0.067 | — |
| chr4_38749468_T_G | chr4:38749468 | -0.037 | -0.049 | 0.003 | — |
| chr4_38750358_A_C | chr4:38750358 | -0.003 | 0.005 | 0.064 | — |
| chr4_38750367_A_G | chr4:38750367 | -0.004 | 0.012 | 0.064 | — |
| chr4_38749468_T_A | chr4:38749468 | -0.035 | 0.008 | -0.005 | — |
| chr4_38749452_T_G | chr4:38749452 | -0.034 | -0.010 | 0.003 | — |
| chr4_38749491_T_G | chr4:38749491 | -0.034 | -0.001 | 0.006 | — |
| chr4_38749510_A_T | chr4:38749510 | 0.034 | 0.017 | -0.014 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.