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TPM1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TPM1
chr15:62,942,746..63,171,914, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_63010536_T_C | chr15:63010536 | 21,216 | 11,456 | 16,064 | — |
| chr15_62998471_T_G | chr15:62998471 | 18,560 | 9,264 | 19,968 | 6.6e-6 |
| chr15_62967375_C_A | chr15:62967375 | 15,264 | 5,632 | 24,256 | 6.6e-6 |
| chr15_62998084_T_C | chr15:62998084 | 12,160 | 1,760 | 17,664 | 1.3e-5 |
| chr15_63010534_T_G | chr15:63010534 | 12,096 | 6,432 | 9,856 | — |
| chr15_63006626_C_T | chr15:63006626 | 10,080 | 4,224 | 10,944 | 2.5e-4 |
| chr15_63010529_G_C | chr15:63010529 | 8,288 | 4,112 | 7,616 | — |
| chr15_62967373_C_T | chr15:62967373 | 8,224 | 3,440 | 13,696 | 2.3e-4 |
| chr15_63006663_G_A | chr15:63006663 | 8,224 | 3,024 | 6,976 | 6.6e-6 |
| chr15_63006444_C_A | chr15:63006444 | 8,160 | 3,136 | 1,824 | 6.6e-6 |
| chr15_62998378_A_G | chr15:62998378 | 8,128 | 4,272 | 9,792 | 2.0e-5 |
| chr15_63010497_G_C | chr15:63010497 | 7,392 | 2,880 | 5,824 | — |
| chr15_63006246_C_T | chr15:63006246 | 6,320 | 3,056 | 4,608 | 3.3e-5 |
| chr15_63010538_T_A | chr15:63010538 | -6,240 | -2,464 | -5,184 | — |
| chr15_62967426_G_T | chr15:62967426 | 6,208 | 2,192 | 6,144 | 6.6e-6 |
| chr15_63010496_G_C | chr15:63010496 | 6,176 | 2,592 | 5,248 | — |
| chr15_63010533_G_A | chr15:63010533 | -6,048 | -1,680 | -5,568 | 6.6e-6 |
| chr15_63010542_C_T | chr15:63010542 | 5,824 | 2,096 | 4,224 | — |
| chr15_63010535_T_C | chr15:63010535 | 5,664 | 2,272 | 5,120 | — |
| chr15_63010538_T_G | chr15:63010538 | -5,664 | -2,544 | -4,608 | — |
| chr15_63010520_A_C | chr15:63010520 | 5,600 | 2,592 | 5,760 | — |
| chr15_63010497_G_T | chr15:63010497 | 5,568 | 2,016 | 3,584 | — |
| chr15_63010544_T_C | chr15:63010544 | 5,376 | 2,240 | 4,800 | — |
| chr15_62998198_C_G | chr15:62998198 | -5,248 | -848 | -2,432 | 6.6e-6 |
| chr15_63010540_G_A | chr15:63010540 | -5,152 | -2,176 | -4,928 | — |
| chr15_63010545_G_T | chr15:63010545 | 5,056 | 2,320 | 5,376 | — |
| chr15_62998512_G_A | chr15:62998512 | 5,024 | 2,368 | 9,792 | 6.6e-6 |
| chr15_63010532_G_T | chr15:63010532 | 4,960 | 2,080 | 3,456 | — |
| chr15_63010538_T_C | chr15:63010538 | -4,960 | -2,224 | -3,968 | 2.6e-5 |
| chr15_63010540_G_C | chr15:63010540 | -4,608 | -1,952 | -3,968 | — |
| chr15_63010499_A_C | chr15:63010499 | 4,544 | 1,792 | 3,648 | — |
| chr15_63010537_A_C | chr15:63010537 | -4,512 | -1,760 | -4,736 | — |
| chr15_63010532_G_A | chr15:63010532 | 4,320 | 2,272 | 3,136 | — |
| chr15_63010532_G_C | chr15:63010532 | 4,224 | 1,760 | 3,520 | — |
| chr15_63010542_C_G | chr15:63010542 | -4,192 | -1,696 | -4,544 | — |
| chr15_62998396_C_T | chr15:62998396 | -4,192 | -1,632 | -3,520 | 6.6e-6 |
| chr15_62998355_A_G | chr15:62998355 | 4,160 | 2,416 | 5,504 | 6.6e-6 |
| chr15_63010541_A_C | chr15:63010541 | -4,160 | -1,104 | -3,840 | — |
| chr15_63010521_G_C | chr15:63010521 | 4,032 | 1,744 | 3,968 | — |
| chr15_63010537_A_T | chr15:63010537 | -3,904 | -1,664 | -4,480 | — |
| chr15_62995172_A_T | chr15:62995172 | -3,840 | -640 | -2,176 | 6.6e-6 |
| chr15_63010514_C_A | chr15:63010514 | -3,776 | -1,520 | -3,904 | — |
| chr15_63010524_C_A | chr15:63010524 | -3,744 | -1,408 | -4,160 | — |
| chr15_63010520_A_T | chr15:63010520 | -3,744 | -1,760 | -3,904 | — |
| chr15_63010528_T_C | chr15:63010528 | 3,616 | 1,648 | 4,160 | — |
| chr15_63010493_T_A | chr15:63010493 | 3,616 | 1,248 | 1,536 | — |
| chr15_63010539_T_A | chr15:63010539 | -3,520 | -1,360 | -4,416 | — |
| chr15_62998296_C_A | chr15:62998296 | -3,488 | -1,184 | -4,032 | 6.6e-6 |
| chr15_63010512_T_G | chr15:63010512 | 3,296 | 1,504 | 4,160 | — |
| chr15_63010528_T_A | chr15:63010528 | -3,296 | -1,440 | -3,072 | — |
| chr15_63010495_A_C | chr15:63010495 | 3,264 | 1,360 | 3,712 | — |
| chr15_63010541_A_T | chr15:63010541 | -3,264 | -1,056 | -3,520 | — |
| chr15_63010488_C_G | chr15:63010488 | -3,168 | -1,072 | -2,560 | — |
| chr15_63010541_A_G | chr15:63010541 | -3,168 | -1,072 | -2,368 | — |
| chr15_63010539_T_G | chr15:63010539 | -3,104 | -1,168 | -3,200 | — |
| chr15_63006600_A_G | chr15:63006600 | -3,040 | -1,312 | -5,440 | 6.6e-6 |
| chr15_63010533_G_T | chr15:63010533 | -3,008 | -1,216 | -3,904 | — |
| chr15_63010543_C_G | chr15:63010543 | -3,008 | -832 | -2,112 | — |
| chr15_62998395_T_C | chr15:62998395 | -2,976 | -992 | -2,048 | 6.6e-6 |
| chr15_63010542_C_A | chr15:63010542 | -2,912 | -1,136 | -3,456 | — |
| chr15_63006598_C_T | chr15:63006598 | -2,880 | -976 | -4,800 | 2.0e-5 |
| chr15_63010494_G_C | chr15:63010494 | 2,848 | 1,296 | 2,368 | — |
| chr15_63006674_T_C | chr15:63006674 | -2,784 | -1,264 | -4,544 | 2.0e-5 |
| chr15_63010495_A_T | chr15:63010495 | 2,752 | 1,104 | 1,856 | — |
| chr15_63010492_T_G | chr15:63010492 | 2,688 | 1,232 | 2,816 | — |
| chr15_63010498_A_T | chr15:63010498 | 2,688 | 1,072 | 2,496 | — |
| chr15_62998296_C_T | chr15:62998296 | -2,656 | -1,136 | -3,136 | 3.9e-5 |
| chr15_62998424_C_T | chr15:62998424 | -2,656 | -864 | -1,088 | 5.9e-5 |
| chr15_63010472_G_A | chr15:63010472 | -2,624 | -1,152 | -2,752 | 6.6e-6 |
| chr15_63010496_G_T | chr15:63010496 | 2,624 | 1,120 | 1,216 | — |
| chr15_63010508_T_G | chr15:63010508 | 2,592 | 1,936 | 3,648 | — |
| chr15_62998400_A_C | chr15:62998400 | -2,560 | -640 | 448 | 5.9e-5 |
| chr15_63006627_G_A | chr15:63006627 | 2,560 | 928 | 2,432 | 3.3e-5 |
| chr15_63010525_T_A | chr15:63010525 | 2,432 | 1,440 | 2,560 | — |
| chr15_63010514_C_G | chr15:63010514 | -2,400 | -912 | -1,792 | — |
| chr15_63010488_C_A | chr15:63010488 | -2,368 | -800 | -2,560 | — |
| chr15_63010530_A_C | chr15:63010530 | 2,368 | 1,024 | 2,560 | — |
| chr15_63010498_A_C | chr15:63010498 | 2,336 | 688 | 2,240 | — |
| chr15_62998171_A_G | chr15:62998171 | 2,304 | -320 | 3,136 | 2.6e-1 |
| chr15_63010526_G_C | chr15:63010526 | -2,272 | -1,200 | -2,560 | — |
| chr15_63010511_C_G | chr15:63010511 | 2,272 | 1,040 | 2,432 | — |
| chr15_63006280_A_C | chr15:63006280 | 2,256 | 1,072 | 2,336 | 2.0e-5 |
| chr15_63010533_G_C | chr15:63010533 | -2,240 | -1,072 | -1,792 | — |
| chr15_63010537_A_G | chr15:63010537 | 2,208 | 704 | 2,304 | — |
| chr15_62998194_G_A | chr15:62998194 | 2,208 | 640 | 832 | 2.0e-5 |
| chr15_62967382_C_A | chr15:62967382 | 2,176 | 736 | 3,584 | 1.4e-4 |
| chr15_62998423_C_T | chr15:62998423 | -2,176 | -960 | -2,304 | 6.6e-6 |
| chr15_62967310_C_A | chr15:62967310 | 2,144 | 1,392 | 10,304 | 1.3e-5 |
| chr15_62998475_G_A | chr15:62998475 | 2,144 | 896 | 1,856 | 6.6e-6 |
| chr15_63010519_A_C | chr15:63010519 | 2,112 | 976 | 3,072 | — |
| chr15_62998605_C_T | chr15:62998605 | 2,112 | 1,040 | 1,344 | 2.0e-5 |
| chr15_63010545_G_C | chr15:63010545 | 2,080 | 768 | 2,752 | 6.6e-6 |
| chr15_63010546_G_C | chr15:63010546 | -2,048 | -1,088 | -896 | — |
| chr15_63010497_G_A | chr15:63010497 | 2,016 | 768 | 320 | — |
| chr15_63010469_A_T | chr15:63010469 | 1,984 | 896 | 2,304 | — |
| chr15_62998193_C_T | chr15:62998193 | 1,984 | 416 | 384 | 1.3e-5 |
| chr15_62998409_C_T | chr15:62998409 | -1,952 | -272 | -1,408 | 6.6e-6 |
| chr15_62967314_A_G | chr15:62967314 | 1,920 | 1,280 | 6,656 | 2.0e-5 |
| chr15_62967416_C_T | chr15:62967416 | -1,920 | -416 | -4,416 | 1.3e-5 |
| chr15_63006709_T_G | chr15:63006709 | 1,920 | 736 | 2,368 | 6.6e-6 |
| chr15_62995169_C_A | chr15:62995169 | -1,888 | -272 | -2,624 | 6.6e-6 |
| chr15_63010434_A_G | chr15:63010434 | -1,888 | -592 | -1,088 | — |
| chr15_63010517_T_C | chr15:63010517 | 1,856 | 688 | 2,816 | — |
| chr15_63010503_T_G | chr15:63010503 | -1,856 | -752 | -1,536 | — |
| chr15_63010524_C_T | chr15:63010524 | -1,824 | -656 | -2,432 | — |
| chr15_63010515_A_C | chr15:63010515 | 1,792 | 848 | 2,944 | — |
| chr15_63010430_A_G | chr15:63010430 | 1,792 | 560 | 2,880 | — |
| chr15_63010458_G_C | chr15:63010458 | 1,760 | 784 | 1,536 | — |
| chr15_62995072_G_T | chr15:62995072 | -1,728 | -752 | -3,136 | 6.6e-6 |
| chr15_62967425_C_G | chr15:62967425 | -1,728 | -480 | -3,008 | 2.0e-5 |
| chr15_63010527_G_T | chr15:63010527 | -1,728 | -656 | -2,048 | — |
| chr15_63010468_G_A | chr15:63010468 | 1,728 | 960 | 832 | — |
| chr15_63010527_G_A | chr15:63010527 | -1,728 | 80 | -896 | 6.6e-6 |
| chr15_62967438_C_T | chr15:62967438 | 1,696 | 688 | 2,176 | 4.3e-4 |
| chr15_63010509_T_G | chr15:63010509 | 1,696 | 768 | 2,176 | — |
| chr15_63010516_G_T | chr15:63010516 | -1,696 | -688 | -1,152 | — |
| chr15_62967327_A_T | chr15:62967327 | 1,664 | 976 | 4,160 | 7.9e-5 |
| chr15_62967468_A_C | chr15:62967468 | 1,664 | 640 | 2,432 | 2.0e-5 |
| chr15_63010510_T_G | chr15:63010510 | 1,664 | 752 | 2,240 | — |
| chr15_62995168_G_A | chr15:62995168 | -1,664 | -432 | -1,984 | 6.6e-6 |
| chr15_62998658_C_T | chr15:62998658 | 1,632 | 1,040 | 2,880 | 2.0e-5 |
| chr15_63006624_G_C | chr15:63006624 | -1,568 | -992 | -2,176 | 6.6e-6 |
| chr15_63010488_C_T | chr15:63010488 | -1,568 | -592 | -1,920 | — |
| chr15_62967361_G_A | chr15:62967361 | -1,504 | -512 | -3,136 | 5.9e-5 |
| chr15_62995111_T_G | chr15:62995111 | 1,504 | 752 | 2,432 | 6.6e-6 |
| chr15_62998548_G_A | chr15:62998548 | 1,472 | 720 | 2,176 | 2.6e-5 |
| chr15_63010525_T_C | chr15:63010525 | 1,472 | 352 | 1,728 | — |
| chr15_63010496_G_A | chr15:63010496 | -1,440 | -736 | -2,368 | — |
| chr15_62967360_C_T | chr15:62967360 | -1,408 | -224 | -2,688 | 5.9e-5 |
| chr15_62967287_G_A | chr15:62967287 | 1,408 | 192 | 2,368 | 6.6e-6 |
| chr15_63010522_T_C | chr15:63010522 | 1,408 | 368 | 1,920 | — |
| chr15_62998696_G_A | chr15:62998696 | -1,376 | -1,312 | -4,096 | 6.6e-6 |
| chr15_63010502_G_T | chr15:63010502 | -1,376 | -896 | -2,560 | — |
| chr15_63006693_G_A | chr15:63006693 | -1,376 | -656 | -2,368 | 1.3e-5 |
| chr15_62967474_T_G | chr15:62967474 | 1,344 | 544 | 2,112 | 6.6e-6 |
| chr15_62967385_G_C | chr15:62967385 | 1,344 | 416 | 1,856 | 6.6e-6 |
| chr15_63010535_T_A | chr15:63010535 | -1,344 | -864 | -1,856 | — |
| chr15_63010531_A_C | chr15:63010531 | 1,344 | 304 | 1,792 | — |
| chr15_62967400_T_A | chr15:62967400 | -1,312 | -336 | -2,816 | 6.6e-6 |
| chr15_63010462_A_G | chr15:63010462 | 1,312 | 624 | 1,792 | — |
| chr15_62998509_G_C | chr15:62998509 | 1,312 | 352 | -1,728 | 6.6e-6 |
| chr15_63006662_C_T | chr15:63006662 | -1,248 | -240 | -1,792 | 6.6e-5 |
| chr15_62967181_C_T | chr15:62967181 | -1,216 | 208 | -2,752 | 7.2e-5 |
| chr15_62967396_G_A | chr15:62967396 | -1,216 | -400 | -2,304 | 6.6e-6 |
| chr15_63006797_G_A | chr15:63006797 | 1,184 | 816 | 3,776 | 6.6e-6 |
| chr15_62967415_G_T | chr15:62967415 | -1,184 | -224 | -3,072 | 1.3e-5 |
| chr15_62967398_G_T | chr15:62967398 | -1,152 | -256 | -3,072 | 6.6e-6 |
| chr15_63010422_G_T | chr15:63010422 | -1,152 | -368 | -2,560 | — |
| chr15_62967331_T_C | chr15:62967331 | -1,120 | -640 | -2,304 | 2.3e-4 |
| chr15_63010515_A_G | chr15:63010515 | 1,120 | 576 | 2,048 | — |
| chr15_63010525_T_G | chr15:63010525 | 1,120 | 704 | 1,856 | — |
| chr15_62998728_A_G | chr15:62998728 | 1,056 | 736 | 2,816 | 2.0e-5 |
| chr15_62994951_T_C | chr15:62994951 | 1,024 | 304 | 2,176 | 6.8e-6 |
| chr15_62967444_A_G | chr15:62967444 | 992 | 256 | 2,240 | 3.9e-5 |
| chr15_62998316_G_C | chr15:62998316 | -992 | -704 | -2,048 | 6.6e-6 |
| chr15_62967318_C_T | chr15:62967318 | 960 | 336 | 2,368 | 6.6e-6 |
| chr15_62967155_C_T | chr15:62967155 | 960 | 208 | 1,856 | 1.3e-5 |
| chr15_62995105_G_A | chr15:62995105 | -928 | -480 | -3,264 | 6.6e-6 |
| chr15_63006570_A_G | chr15:63006570 | 928 | 0 | 2,240 | 3.9e-5 |
| chr15_62998760_G_A | chr15:62998760 | -928 | -576 | -2,176 | 6.6e-6 |
| chr15_62995004_A_T | chr15:62995004 | -928 | -272 | -2,112 | 6.6e-6 |
| chr15_63006621_A_G | chr15:63006621 | 928 | 176 | 2,048 | 1.3e-5 |
| chr15_62967291_C_T | chr15:62967291 | -896 | -624 | -3,136 | 3.3e-5 |
| chr15_62967259_T_G | chr15:62967259 | 896 | 368 | 2,432 | 1.3e-5 |
| chr15_62998373_C_A | chr15:62998373 | -896 | -1,072 | -2,304 | 1.2e-4 |
| chr15_62967206_C_T | chr15:62967206 | -896 | 112 | -2,112 | 4.6e-5 |
| chr15_63006328_C_A | chr15:63006328 | 864 | 288 | 3,904 | 7.9e-6 |
| chr15_63006330_T_C | chr15:63006330 | -864 | -352 | -3,616 | 9.1e-4 |
| chr15_62998701_A_T | chr15:62998701 | -864 | -896 | -2,880 | 6.6e-6 |
| chr15_62967425_C_T | chr15:62967425 | -864 | -272 | -1,920 | 3.3e-5 |
| chr15_62967158_C_A | chr15:62967158 | 832 | 80 | 1,920 | 6.6e-6 |
| chr15_62998641_T_A | chr15:62998641 | -768 | -752 | -1,728 | 4.6e-5 |
| chr15_62967446_C_A | chr15:62967446 | -704 | -368 | -1,984 | 6.6e-6 |
| chr15_62967148_G_C | chr15:62967148 | 672 | 160 | 2,112 | 6.6e-6 |
| chr15_62967240_G_A | chr15:62967240 | 640 | 368 | 1,728 | 6.6e-6 |
| chr15_63006353_A_C | chr15:63006353 | 608 | 224 | 2,848 | 1.9e-4 |
| chr15_62995150_G_A | chr15:62995150 | 576 | 672 | -7,104 | 6.6e-6 |
| chr15_63006340_C_T | chr15:63006340 | 576 | 336 | 3,904 | 5.8e-5 |
| chr15_63006326_C_T | chr15:63006326 | 544 | 272 | 3,040 | 3.3e-5 |
| chr15_62998504_T_G | chr15:62998504 | 544 | 352 | 1,920 | 2.6e-5 |
| chr15_63006345_A_T | chr15:63006345 | 512 | 240 | 3,808 | 1.3e-2 |
| chr15_62998702_C_T | chr15:62998702 | -512 | -704 | -2,752 | 6.6e-6 |
| chr15_62998608_C_A | chr15:62998608 | -512 | -352 | -1,792 | 6.6e-6 |
| chr15_63006316_C_T | chr15:63006316 | 512 | 192 | 1,760 | 1.8e-5 |
| chr15_63006356_T_C | chr15:63006356 | -480 | -144 | -1,984 | 1.6e-2 |
| chr15_63006341_A_G | chr15:63006341 | 448 | 336 | 3,744 | 1.9e-5 |
| chr15_62998695_A_C | chr15:62998695 | -448 | -896 | -3,008 | 1.3e-5 |
| chr15_63006334_C_T | chr15:63006334 | 448 | 208 | 2,880 | 3.0e-4 |
| chr15_63006571_T_C | chr15:63006571 | -448 | -336 | -2,368 | 6.6e-6 |
| chr15_62998381_C_T | chr15:62998381 | -416 | -224 | -1,920 | 9.2e-5 |
| chr15_63010418_A_C | chr15:63010418 | 384 | -80 | 1,792 | — |
| chr15_63006336_C_T | chr15:63006336 | 352 | 128 | 3,040 | 2.4e-1 |
| chr15_63006338_C_T | chr15:63006338 | 320 | 224 | 3,936 | 2.7e-3 |
| chr15_63006347_A_G | chr15:63006347 | 320 | 304 | 3,104 | 1.8e-3 |
| chr15_62998474_T_G | chr15:62998474 | -256 | 336 | 1,856 | 6.6e-6 |
| chr15_63006342_C_T | chr15:63006342 | 224 | 336 | 3,808 | 9.5e-6 |
| chr15_62998691_T_C | chr15:62998691 | 192 | 256 | 1,792 | 1.3e-5 |
| chr15_63006762_C_A | chr15:63006762 | -160 | -288 | -2,112 | 6.6e-6 |
| chr15_62998700_A_C | chr15:62998700 | -64 | -368 | -1,728 | 4.2e-4 |
| chr15_63006315_A_G | chr15:63006315 | -32 | 112 | 1,856 | 9.1e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.