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USP3

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near USP3

chr15:63,404,510..63,694,640, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr15_63466875_C_T	chr15:63466875	-1.000	-0.313	-0.621	<0.001%
chr15_63466517_T_C	chr15:63466517	-0.920	-0.770	-0.859	0.0013%
chr15_63450613_C_T	chr15:63450613	0.330	0.751	1.000	0.0020%
chr15_63466516_T_C	chr15:63466516	-0.691	-0.607	-0.676	0.0013%
chr15_63466500_A_G	chr15:63466500	-0.600	-0.559	-0.644	0.0020%
chr15_63466431_A_T	chr15:63466431	0.524	0.492	0.536	0.0013%
chr15_63461439_G_A	chr15:63461439	0.497	0.118	0.647	0.0013%
chr15_63466550_C_G	chr15:63466550	0.485	0.428	0.562	<0.001%
chr15_63450354_G_C	chr15:63450354	0.429	0.514	0.725	73.2%
chr15_63466484_G_A	chr15:63466484	-0.421	-0.332	-0.500	0.023%
chr15_63449924_G_A	chr15:63449924	-0.257	-0.115	-0.618	<0.001%
chr15_63449924_G_C	chr15:63449924	-0.255	-0.113	-0.611	<0.001%
chr15_63436964_G_C	chr15:63436964	-0.199	-0.096	-0.582	<0.001%
chr15_63449990_C_T	chr15:63449990	0.315	0.227	0.582	0.0013%
chr15_63449872_T_C	chr15:63449872	0.079	-0.002	0.575	<0.001%
chr15_63461473_C_T	chr15:63461473	-0.325	-0.038	-0.513	0.0026%
chr15_63450346_T_A	chr15:63450346	0.222	0.283	0.513	<0.001%
chr15_63450642_C_A	chr15:63450642	0.112	0.264	0.503	<0.001%
chr15_63450615_C_G	chr15:63450615	0.109	0.240	0.480	<0.001%
chr15_63466880_C_T	chr15:63466880	-0.297	-0.035	-0.072	<0.001%
chr15_63437019_T_C	chr15:63437019	-0.296	-0.073	0.078	0.0013%
chr15_63466548_C_G	chr15:63466548	0.293	0.265	0.464	<0.001%
chr15_63437092_G_A	chr15:63437092	0.062	0.093	0.438	0.0020%
chr15_63450042_T_A	chr15:63450042	0.181	0.184	0.438	<0.001%
chr15_63436976_G_A	chr15:63436976	-0.169	-0.109	-0.435	0.0033%
chr15_63437031_C_T	chr15:63437031	-0.261	-0.367	-0.007	0.0020%
chr15_63466786_G_C	chr15:63466786	0.260	0.022	0.144	0.128%
chr15_63461479_G_T	chr15:63461479	-0.258	-0.045	-0.320	0.0013%
chr15_63449891_G_A	chr15:63449891	0.223	0.139	0.386	0.103%
chr15_63449992_C_G	chr15:63449992	-0.242	-0.169	-0.111	0.027%
chr15_63466557_G_T	chr15:63466557	-0.239	-0.173	-0.333	<0.001%
chr15_63461506_A_C	chr15:63461506	-0.234	-0.077	-0.304	<0.001%
chr15_63450645_C_T	chr15:63450645	0.114	0.238	0.359	<0.001%
chr15_63461472_C_T	chr15:63461472	-0.215	-0.026	-0.356	<0.001%
chr15_63466548_C_T	chr15:63466548	0.206	0.256	0.353	<0.001%
chr15_63450615_C_A	chr15:63450615	0.063	0.155	0.350	0.020%
chr15_63461483_G_C	chr15:63461483	-0.206	-0.032	-0.350	<0.001%
chr15_63450012_C_T	chr15:63450012	-0.219	-0.117	-0.314	0.066%
chr15_63466490_G_A	chr15:63466490	-0.188	-0.176	-0.333	<0.001%
chr15_63450239_A_C	chr15:63450239	0.204	0.211	0.261	<0.001%
chr15_63450366_G_T	chr15:63450366	0.198	0.230	0.252	<0.001%
chr15_63450003_C_A	chr15:63450003	-0.173	-0.107	-0.307	<0.001%
chr15_63450262_A_G	chr15:63450262	0.190	0.209	0.307	<0.001%
chr15_63450661_T_A	chr15:63450661	0.013	0.013	0.297	<0.001%
chr15_63461516_A_T	chr15:63461516	0.174	0.006	0.297	0.0013%
chr15_63466470_G_A	chr15:63466470	-0.188	-0.131	-0.255	0.0013%
chr15_63449924_G_T	chr15:63449924	-0.093	-0.027	-0.288	<0.001%
chr15_63450243_C_T	chr15:63450243	-0.180	-0.201	-0.268	<0.001%
chr15_63466428_T_C	chr15:63466428	-0.179	-0.163	-0.154	<0.001%
chr15_63437013_G_C	chr15:63437013	-0.130	-0.005	-0.268	0.0013%
chr15_63449992_C_T	chr15:63449992	-0.169	-0.115	-0.150	<0.001%
chr15_63450589_C_T	chr15:63450589	0.012	-0.006	0.268	0.0033%
chr15_63461500_C_G	chr15:63461500	-0.144	0.011	-0.265	<0.001%
chr15_63466573_G_C	chr15:63466573	-0.167	-0.259	-0.176	0.0013%
chr15_63450445_G_T	chr15:63450445	0.165	0.219	0.176	<0.001%
chr15_63466549_T_C	chr15:63466549	0.163	0.147	0.261	0.0026%
chr15_63449927_C_T	chr15:63449927	-0.151	-0.058	-0.255	0.0013%
chr15_63449941_G_T	chr15:63449941	-0.072	-0.030	-0.255	<0.001%
chr15_63466611_A_G	chr15:63466611	0.128	0.099	0.255	<0.001%
chr15_63450282_G_A	chr15:63450282	0.159	0.149	0.252	<0.001%
chr15_63449966_C_T	chr15:63449966	-0.159	-0.123	-0.144	0.0033%
chr15_63461317_C_T	chr15:63461317	0.159	0.067	0.088	0.0013%
chr15_63461530_G_A	chr15:63461530	-0.152	-0.026	-0.252	61.9%
chr15_63461399_C_G	chr15:63461399	0.098	0.030	0.248	0.022%
chr15_63461538_A_G	chr15:63461538	-0.156	-0.011	-0.232	<0.001%
chr15_63436944_G_A	chr15:63436944	0.155	-0.089	-0.092	<0.001%
chr15_63461419_C_G	chr15:63461419	-0.155	-0.022	-0.167	0.478%
chr15_63466900_C_G	chr15:63466900	0.146	0.035	0.242	0.0026%
chr15_63450448_G_A	chr15:63450448	0.151	0.235	0.225	0.0046%
chr15_63466786_G_T	chr15:63466786	0.151	0.016	-0.007	0.047%
chr15_63450132_C_G	chr15:63450132	-0.041	-0.035	0.235	71.3%
chr15_63461564_C_T	chr15:63461564	-0.102	-0.026	-0.229	0.0020%
chr15_63461425_C_T	chr15:63461425	0.143	0.018	0.121	<0.001%
chr15_63450222_T_C	chr15:63450222	0.079	0.126	0.225	<0.001%
chr15_63466504_G_A	chr15:63466504	-0.142	-0.096	-0.203	0.0013%
chr15_63461453_G_A	chr15:63461453	0.141	0.042	0.026	<0.001%
chr15_63461460_G_A	chr15:63461460	0.141	-0.003	0.170	0.0013%
chr15_63436987_G_C	chr15:63436987	-0.041	-0.163	-0.222	0.0020%
chr15_63461508_T_C	chr15:63461508	-0.140	0.000	-0.219	0.0020%
chr15_63466671_C_A	chr15:63466671	0.140	0.061	0.170	0.0033%
chr15_63437034_A_T	chr15:63437034	-0.139	-0.188	-0.026	<0.001%
chr15_63436835_A_G	chr15:63436835	0.136	0.054	0.020	0.0020%
chr15_63466428_T_A	chr15:63466428	-0.136	-0.115	-0.049	<0.001%
chr15_63437090_T_C	chr15:63437090	0.070	0.203	0.212	0.0079%
chr15_63461535_G_A	chr15:63461535	0.134	0.006	0.183	<0.001%
chr15_63436946_T_C	chr15:63436946	0.064	-0.010	0.209	<0.001%
chr15_63449941_G_A	chr15:63449941	-0.058	-0.021	-0.209	<0.001%
chr15_63450282_G_C	chr15:63450282	0.127	0.125	0.209	<0.001%
chr15_63461485_G_A	chr15:63461485	-0.132	-0.010	-0.176	0.0013%
chr15_63461395_G_C	chr15:63461395	0.111	0.003	0.206	0.269%
chr15_63461453_G_T	chr15:63461453	0.130	0.030	-0.013	0.0033%
chr15_63449933_C_G	chr15:63449933	-0.120	-0.064	-0.203	<0.001%
chr15_63450579_C_T	chr15:63450579	0.049	0.019	0.203	0.0020%
chr15_63466555_C_A	chr15:63466555	-0.128	-0.134	-0.157	0.0013%
chr15_63461420_G_A	chr15:63461420	-0.126	-0.010	-0.026	0.0013%
chr15_63466879_A_G	chr15:63466879	0.124	-0.006	0.092	<0.001%
chr15_63466482_A_C	chr15:63466482	-0.122	-0.029	-0.190	<0.001%
chr15_63461555_G_C	chr15:63461555	0.121	0.021	0.114	0.0013%
chr15_63450676_G_C	chr15:63450676	0.025	-0.002	0.190	<0.001%
chr15_63461434_C_T	chr15:63461434	-0.120	-0.022	-0.167	<0.001%
chr15_63450362_G_C	chr15:63450362	-0.119	-0.117	-0.092	0.285%
chr15_63461419_C_T	chr15:63461419	-0.118	0.003	-0.111	0.0013%
chr15_63461544_G_A	chr15:63461544	-0.080	0.002	-0.186	0.0026%
chr15_63450186_T_A	chr15:63450186	0.073	0.086	0.183	<0.001%
chr15_63466779_C_G	chr15:63466779	0.035	0.051	0.183	<0.001%
chr15_63449817_T_C	chr15:63449817	-0.030	0.000	-0.180	<0.001%
chr15_63461516_A_C	chr15:63461516	0.084	0.010	0.180	<0.001%
chr15_63437032_G_A	chr15:63437032	-0.031	-0.238	0.176	0.0053%
chr15_63437091_T_G	chr15:63437091	-0.064	-0.171	0.176	0.0079%
chr15_63449798_C_T	chr15:63449798	0.046	0.018	0.176	0.0013%
chr15_63450001_A_G	chr15:63450001	0.049	0.043	0.176	<0.001%
chr15_63450373_G_A	chr15:63450373	-0.087	-0.085	-0.176	<0.001%
chr15_63450531_C_G	chr15:63450531	0.066	0.075	0.176	<0.001%
chr15_63450552_G_A	chr15:63450552	-0.057	-0.064	-0.176	0.0026%
chr15_63461481_C_A	chr15:63461481	-0.111	-0.006	-0.098	0.0053%
chr15_63450568_A_G	chr15:63450568	-0.002	0.014	-0.173	0.0020%
chr15_63450138_C_G	chr15:63450138	-0.085	-0.093	-0.170	<0.001%
chr15_63461417_G_C	chr15:63461417	-0.106	-0.016	-0.170	<0.001%
chr15_63461389_G_C	chr15:63461389	0.106	0.011	0.137	0.054%
chr15_63461341_A_C	chr15:63461341	0.076	-0.008	0.167	0.0026%
chr15_63466807_A_T	chr15:63466807	-0.105	0.109	-0.052	<0.001%
chr15_63464859_A_G	chr15:63464859	-0.083	-0.019	0.031	0.0013%
chr15_63449909_T_C	chr15:63449909	0.074	0.062	0.163	<0.001%
chr15_63450151_C_T	chr15:63450151	-0.055	-0.046	-0.163	0.0013%
chr15_63461499_G_C	chr15:63461499	0.102	0.037	0.147	0.0013%
chr15_63449869_C_T	chr15:63449869	-0.074	-0.042	-0.160	<0.001%
chr15_63450361_G_C	chr15:63450361	-0.101	-0.075	-0.098	0.0072%
chr15_63450247_A_G	chr15:63450247	0.101	0.078	0.150	0.0013%
chr15_63450206_A_G	chr15:63450206	0.062	0.083	0.157	<0.001%
chr15_63450656_A_C	chr15:63450656	0.000	-0.003	0.157	0.0013%
chr15_63466390_G_A	chr15:63466390	-0.099	-0.054	-0.101	<0.001%
chr15_63437223_C_T	chr15:63437223	-0.032	-0.046	-0.154	0.0013%
chr15_63466858_C_T	chr15:63466858	-0.097	-0.013	-0.013	<0.001%
chr15_63437020_T_G	chr15:63437020	0.031	0.045	0.150	0.0066%
chr15_63449917_C_G	chr15:63449917	-0.095	-0.059	-0.141	<0.001%
chr15_63450563_T_C	chr15:63450563	0.018	-0.040	0.150	<0.001%
chr15_63450566_C_T	chr15:63450566	0.008	-0.029	0.150	0.0020%
chr15_63450569_C_T	chr15:63450569	0.026	-0.008	0.150	0.0013%
chr15_63466920_T_G	chr15:63466920	0.095	0.019	0.111	<0.001%
chr15_63450615_C_T	chr15:63450615	0.031	0.070	0.147	<0.001%
chr15_63449904_T_C	chr15:63449904	0.091	0.050	0.144	0.0013%
chr15_63449995_C_A	chr15:63449995	0.060	0.064	0.144	0.0033%
chr15_63461544_G_C	chr15:63461544	-0.066	-0.008	-0.144	<0.001%
chr15_63450263_T_G	chr15:63450263	0.089	0.064	0.127	<0.001%
chr15_63450605_C_G	chr15:63450605	-0.003	0.000	0.141	<0.001%
chr15_63450639_C_T	chr15:63450639	0.025	0.054	0.141	0.0026%
chr15_63461427_A_C	chr15:63461427	0.059	-0.016	0.141	<0.001%
chr15_63464847_A_C	chr15:63464847	0.007	-0.001	0.121	—
chr15_63466401_A_G	chr15:63466401	0.089	0.058	0.134	0.0013%
chr15_63466557_G_A	chr15:63466557	-0.089	-0.064	-0.137	0.0039%
chr15_63450310_A_C	chr15:63450310	-0.087	-0.128	-0.127	<0.001%
chr15_63437060_C_T	chr15:63437060	-0.041	-0.104	-0.137	<0.001%
chr15_63450509_G_T	chr15:63450509	0.082	0.073	0.137	0.0026%
chr15_63450652_G_T	chr15:63450652	-0.010	0.005	0.137	0.0013%
chr15_63466847_C_G	chr15:63466847	0.087	0.016	0.046	0.0013%
chr15_63450356_T_C	chr15:63450356	0.086	0.043	0.069	0.0040%
chr15_63450361_G_T	chr15:63450361	-0.086	-0.070	-0.108	0.0020%
chr15_63437040_C_T	chr15:63437040	0.085	-0.187	-0.075	<0.001%
chr15_63449833_A_G	chr15:63449833	0.082	0.058	0.134	<0.001%
chr15_63450636_G_T	chr15:63450636	-0.015	0.003	0.134	0.0013%
chr15_63464950_T_G	chr15:63464950	-0.002	0.008	0.115	—
chr15_63466479_A_T	chr15:63466479	-0.085	-0.038	-0.072	<0.001%
chr15_63466886_C_G	chr15:63466886	0.085	0.013	0.072	<0.001%
chr15_63450238_C_G	chr15:63450238	0.084	0.050	0.098	<0.001%
chr15_63436921_C_T	chr15:63436921	-0.082	-0.102	-0.105	0.0013%
chr15_63449888_C_A	chr15:63449888	-0.026	0.018	-0.131	0.306%
chr15_63461482_C_T	chr15:63461482	0.082	0.013	0.098	0.0066%
chr15_63450202_C_T	chr15:63450202	0.081	0.112	0.121	0.0053%
chr15_63449911_C_T	chr15:63449911	0.041	0.027	0.127	<0.001%
chr15_63450453_A_G	chr15:63450453	0.057	0.075	0.127	21.3%
chr15_63450605_C_T	chr15:63450605	-0.013	0.000	0.127	0.0013%
chr15_63461458_G_A	chr15:63461458	-0.075	-0.010	-0.127	<0.001%
chr15_63464881_G_C	chr15:63464881	-0.002	-0.004	0.110	—
chr15_63461553_T_C	chr15:63461553	0.079	0.018	0.075	0.0020%
chr15_63449967_T_C	chr15:63449967	-0.064	-0.054	-0.124	0.0020%
chr15_63450176_C_A	chr15:63450176	-0.065	-0.078	-0.124	<0.001%
chr15_63450309_G_A	chr15:63450309	-0.061	-0.070	-0.124	<0.001%
chr15_63461511_C_T	chr15:63461511	-0.072	-0.006	-0.124	0.0013%
chr15_63464906_A_T	chr15:63464906	-0.041	-0.015	0.107	—
chr15_63466425_C_T	chr15:63466425	0.078	0.080	0.072	<0.001%
chr15_63466448_C_T	chr15:63466448	0.078	0.045	0.056	20.7%
chr15_63449907_T_C	chr15:63449907	-0.072	-0.032	-0.121	0.114%
chr15_63461370_G_C	chr15:63461370	0.037	0.018	0.121	<0.001%
chr15_63461484_C_T	chr15:63461484	-0.064	0.019	-0.121	<0.001%
chr15_63464852_G_C	chr15:63464852	0.003	-0.005	0.104	—
chr15_63449997_C_A	chr15:63449997	-0.074	-0.032	-0.046	0.0013%
chr15_63450577_A_G	chr15:63450577	-0.049	-0.065	-0.118	0.0020%
chr15_63461400_C_A	chr15:63461400	0.047	0.013	0.118	0.0013%
chr15_63466686_T_C	chr15:63466686	0.033	0.010	0.118	<0.001%
chr15_63466785_G_T	chr15:63466785	0.074	0.010	-0.020	<0.001%
chr15_63466906_C_T	chr15:63466906	-0.016	-0.016	-0.118	0.0020%
chr15_63450424_G_C	chr15:63450424	0.074	0.109	0.082	0.0013%
chr15_63437006_C_T	chr15:63437006	0.004	-0.225	0.052	<0.001%
chr15_63449995_C_G	chr15:63449995	-0.072	-0.016	0.039	0.0013%
chr15_63461490_G_T	chr15:63461490	0.072	0.008	0.072	0.0020%
chr15_63466594_C_G	chr15:63466594	0.072	0.058	0.098	0.0013%
chr15_63450458_C_T	chr15:63450458	0.071	0.088	0.101	<0.001%
chr15_63461463_A_G	chr15:63461463	-0.071	-0.032	-0.098	0.0013%
chr15_63461489_G_T	chr15:63461489	-0.071	-0.002	-0.105	0.101%
chr15_63450195_G_A	chr15:63450195	-0.055	-0.050	-0.111	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.