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VAT1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near VAT1
chr17:42,914,606..43,122,385, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_43022175_A_G | chr17:43022175 | 23,424 | -560 | 4,864 | — |
| chr17_43022107_C_A | chr17:43022107 | 22,272 | 816 | 13,824 | — |
| chr17_43022166_G_C | chr17:43022166 | 13,440 | 800 | 6,400 | — |
| chr17_43022104_G_C | chr17:43022104 | 13,312 | 80 | 512 | — |
| chr17_43022103_G_C | chr17:43022103 | 12,928 | 304 | 2,048 | — |
| chr17_43021953_C_A | chr17:43021953 | 11,264 | 2,592 | 26,112 | — |
| chr17_43022200_G_C | chr17:43022200 | 11,264 | -144 | 4,352 | — |
| chr17_43022201_G_C | chr17:43022201 | 10,880 | -128 | 4,864 | — |
| chr17_43022189_G_C | chr17:43022189 | 10,624 | 48 | 5,120 | — |
| chr17_43022203_G_C | chr17:43022203 | 10,240 | -112 | 5,120 | — |
| chr17_43022203_G_A | chr17:43022203 | 9,856 | 384 | 9,216 | — |
| chr17_43022197_G_C | chr17:43022197 | 9,344 | -272 | 4,864 | — |
| chr17_43022200_G_T | chr17:43022200 | 9,344 | 144 | 6,912 | — |
| chr17_43022203_G_T | chr17:43022203 | 9,344 | 416 | 8,960 | — |
| chr17_43022200_G_A | chr17:43022200 | 9,088 | 176 | 8,192 | — |
| chr17_43022198_G_C | chr17:43022198 | 8,960 | 144 | 4,864 | — |
| chr17_43022202_C_A | chr17:43022202 | 8,448 | 272 | 8,192 | 6.6e-6 |
| chr17_43022195_G_C | chr17:43022195 | 8,192 | -48 | 1,792 | — |
| chr17_43022197_G_T | chr17:43022197 | 8,192 | 80 | 6,912 | — |
| chr17_43022201_G_T | chr17:43022201 | 8,192 | 256 | 8,192 | — |
| chr17_43022210_G_C | chr17:43022210 | 8,192 | 32 | 4,864 | — |
| chr17_43021919_C_T | chr17:43021919 | 7,936 | 2,400 | 24,576 | — |
| chr17_43022202_C_T | chr17:43022202 | 7,936 | 416 | 9,216 | 6.6e-6 |
| chr17_43022111_G_C | chr17:43022111 | 7,808 | 160 | 2,048 | — |
| chr17_43022204_G_A | chr17:43022204 | 7,680 | 592 | 9,472 | — |
| chr17_43022195_G_T | chr17:43022195 | 7,680 | 560 | 7,936 | — |
| chr17_43022110_G_C | chr17:43022110 | 7,680 | 240 | 768 | — |
| chr17_43022105_G_C | chr17:43022105 | 7,552 | 480 | 4,096 | — |
| chr17_43022204_G_C | chr17:43022204 | 7,552 | 80 | 5,376 | — |
| chr17_43022201_G_A | chr17:43022201 | 7,296 | 416 | 7,168 | — |
| chr17_43022174_C_G | chr17:43022174 | 7,168 | 64 | 768 | 6.6e-6 |
| chr17_43022199_C_A | chr17:43022199 | 7,040 | 320 | 9,984 | — |
| chr17_43022207_G_T | chr17:43022207 | 7,040 | 688 | 9,984 | — |
| chr17_43022110_G_A | chr17:43022110 | 7,040 | 736 | 6,400 | — |
| chr17_43022206_G_T | chr17:43022206 | 6,784 | 480 | 7,936 | — |
| chr17_43022110_G_T | chr17:43022110 | 6,784 | 576 | 5,120 | — |
| chr17_43022165_A_G | chr17:43022165 | -6,784 | -560 | -3,584 | — |
| chr17_43022207_G_A | chr17:43022207 | 6,656 | 704 | 10,752 | — |
| chr17_43022109_G_C | chr17:43022109 | 6,528 | 240 | 1,792 | — |
| chr17_43022137_C_G | chr17:43022137 | 6,400 | 1,760 | 10,496 | — |
| chr17_43022199_C_T | chr17:43022199 | 6,272 | 544 | 8,448 | — |
| chr17_43021934_A_C | chr17:43021934 | -6,208 | -672 | 9,984 | — |
| chr17_43021933_C_G | chr17:43021933 | 6,144 | 2,096 | 17,408 | — |
| chr17_43022152_T_C | chr17:43022152 | -6,144 | -416 | -1,792 | — |
| chr17_43022204_G_T | chr17:43022204 | 6,016 | 480 | 8,192 | — |
| chr17_43022197_G_A | chr17:43022197 | 6,016 | 304 | 6,912 | 1.3e-5 |
| chr17_43022170_T_G | chr17:43022170 | -6,016 | -496 | -2,048 | — |
| chr17_43022205_C_T | chr17:43022205 | 5,888 | 640 | 9,984 | — |
| chr17_43022111_G_T | chr17:43022111 | 5,888 | 480 | 4,352 | — |
| chr17_43022145_C_G | chr17:43022145 | 5,888 | 256 | -256 | — |
| chr17_43022167_C_T | chr17:43022167 | 5,760 | 400 | 1,536 | — |
| chr17_43022198_G_T | chr17:43022198 | 5,632 | 448 | 7,424 | — |
| chr17_43022111_G_A | chr17:43022111 | 5,632 | 544 | 5,376 | — |
| chr17_43022206_G_C | chr17:43022206 | 5,504 | 16 | 4,096 | — |
| chr17_43022207_G_C | chr17:43022207 | 5,504 | 48 | 3,584 | — |
| chr17_43022205_C_A | chr17:43022205 | 5,376 | 496 | 10,496 | — |
| chr17_43022206_G_A | chr17:43022206 | 5,376 | 576 | 7,936 | — |
| chr17_43022109_G_A | chr17:43022109 | 5,376 | 624 | 6,400 | 1.3e-5 |
| chr17_43022212_C_G | chr17:43022212 | -5,248 | -144 | -4,096 | — |
| chr17_43021985_T_C | chr17:43021985 | -5,184 | -400 | -4,352 | — |
| chr17_43022103_G_A | chr17:43022103 | 4,992 | 608 | 4,864 | — |
| chr17_43022187_G_C | chr17:43022187 | 4,992 | -32 | 256 | — |
| chr17_43022202_C_G | chr17:43022202 | 4,992 | -352 | 4,864 | — |
| chr17_43021935_C_A | chr17:43021935 | -4,864 | -352 | 8,192 | — |
| chr17_43022184_G_A | chr17:43022184 | 4,736 | 1,872 | 11,520 | — |
| chr17_43021930_G_C | chr17:43021930 | -4,736 | -560 | -4,608 | — |
| chr17_43022089_C_G | chr17:43022089 | -4,608 | 272 | 512 | — |
| chr17_43022209_G_T | chr17:43022209 | 4,480 | 832 | 7,936 | — |
| chr17_43022112_G_A | chr17:43022112 | 4,480 | 768 | 5,120 | — |
| chr17_43021982_C_G | chr17:43021982 | 4,480 | 368 | 1,280 | — |
| chr17_43022031_C_G | chr17:43022031 | 4,480 | 64 | -1,280 | — |
| chr17_43022113_C_G | chr17:43022113 | -4,480 | 320 | -1,280 | — |
| chr17_43021934_A_T | chr17:43021934 | -4,416 | -496 | 10,752 | — |
| chr17_43022012_G_C | chr17:43022012 | 4,416 | 368 | 2,048 | — |
| chr17_43022046_G_C | chr17:43022046 | 4,352 | 640 | 7,936 | — |
| chr17_43022054_A_C | chr17:43022054 | 4,352 | 272 | 2,560 | — |
| chr17_43022210_G_T | chr17:43022210 | 4,224 | 672 | 7,936 | — |
| chr17_43022195_G_A | chr17:43022195 | 4,224 | 528 | 6,400 | — |
| chr17_43022163_T_G | chr17:43022163 | -4,096 | -448 | -5,376 | — |
| chr17_43022199_C_G | chr17:43022199 | 4,096 | -368 | 5,120 | — |
| chr17_43021934_A_G | chr17:43021934 | -4,032 | -624 | 11,264 | — |
| chr17_43022215_T_G | chr17:43022215 | -3,968 | -528 | -8,704 | — |
| chr17_43022198_G_A | chr17:43022198 | 3,968 | 400 | 7,936 | — |
| chr17_43022165_A_C | chr17:43022165 | -3,968 | -864 | -6,656 | — |
| chr17_43022029_C_G | chr17:43022029 | 3,968 | 448 | 5,120 | — |
| chr17_43021953_C_G | chr17:43021953 | 3,648 | 512 | 4,608 | — |
| chr17_43022209_G_A | chr17:43022209 | 3,584 | 656 | 6,912 | — |
| chr17_43022208_C_A | chr17:43022208 | 3,328 | 624 | 8,192 | — |
| chr17_43022196_C_A | chr17:43022196 | 3,328 | 256 | 7,168 | — |
| chr17_43022105_G_A | chr17:43022105 | 3,328 | 432 | 4,608 | — |
| chr17_43021939_G_C | chr17:43021939 | 3,264 | 1,296 | 12,800 | — |
| chr17_43022106_C_A | chr17:43022106 | 3,200 | 400 | 6,144 | — |
| chr17_43021935_C_T | chr17:43021935 | -3,136 | -608 | 9,984 | — |
| chr17_43022210_G_A | chr17:43022210 | 3,072 | 832 | 8,960 | — |
| chr17_43022208_C_T | chr17:43022208 | 3,072 | 512 | 8,192 | 3.5e-4 |
| chr17_43021969_C_G | chr17:43021969 | 3,072 | -160 | 4,608 | — |
| chr17_43021935_C_G | chr17:43021935 | -3,008 | -544 | 11,520 | — |
| chr17_43022103_G_T | chr17:43022103 | 2,944 | 640 | 5,888 | — |
| chr17_43022189_G_A | chr17:43022189 | 2,944 | 560 | 5,376 | — |
| chr17_43021969_C_T | chr17:43021969 | 2,880 | 1,328 | 10,496 | — |
| chr17_43022211_C_A | chr17:43022211 | 2,816 | 608 | 8,448 | — |
| chr17_43022187_G_T | chr17:43022187 | 2,816 | 512 | 6,400 | — |
| chr17_43022053_G_C | chr17:43022053 | 2,816 | 224 | 5,632 | — |
| chr17_43022048_T_C | chr17:43022048 | 2,816 | 192 | 5,376 | — |
| chr17_43022189_G_T | chr17:43022189 | 2,688 | 464 | 7,168 | — |
| chr17_43022193_A_G | chr17:43022193 | -2,688 | -896 | -5,632 | — |
| chr17_43022220_A_C | chr17:43022220 | -2,560 | -1,456 | -16,128 | — |
| chr17_43022219_G_T | chr17:43022219 | 2,560 | 800 | 7,936 | — |
| chr17_43022180_A_G | chr17:43022180 | -2,432 | -688 | -8,192 | — |
| chr17_43021926_A_C | chr17:43021926 | -2,432 | -560 | -6,400 | 1.3e-5 |
| chr17_43021979_G_A | chr17:43021979 | 2,432 | -304 | 5,376 | — |
| chr17_43022227_G_T | chr17:43022227 | 2,432 | 768 | 4,608 | — |
| chr17_43022050_T_A | chr17:43022050 | 2,304 | 1,152 | 7,680 | — |
| chr17_43022213_C_G | chr17:43022213 | -2,304 | -256 | -5,888 | — |
| chr17_43021938_T_A | chr17:43021938 | -2,240 | -272 | 4,864 | — |
| chr17_43022106_C_G | chr17:43022106 | 2,176 | 416 | 8,448 | — |
| chr17_43022196_C_T | chr17:43022196 | 2,176 | 448 | 7,680 | — |
| chr17_43022215_T_C | chr17:43022215 | -2,176 | -688 | -7,424 | — |
| chr17_43022115_C_T | chr17:43022115 | -2,176 | 0 | 5,376 | — |
| chr17_43022092_G_A | chr17:43022092 | 2,048 | 1,216 | 12,032 | — |
| chr17_43022228_G_T | chr17:43022228 | 2,048 | 976 | 9,728 | — |
| chr17_43022193_A_C | chr17:43022193 | -2,048 | -640 | -8,704 | — |
| chr17_43022229_G_T | chr17:43022229 | 2,048 | 1,424 | 7,168 | — |
| chr17_43021936_C_A | chr17:43021936 | -1,984 | -368 | 9,984 | — |
| chr17_43021932_T_A | chr17:43021932 | -1,984 | -512 | 4,352 | — |
| chr17_43021911_G_C | chr17:43021911 | -1,952 | -192 | -5,888 | — |
| chr17_43021906_G_C | chr17:43021906 | -1,952 | -256 | -5,120 | — |
| chr17_43022149_G_A | chr17:43022149 | 1,920 | 1,072 | 4,864 | — |
| chr17_43022115_C_G | chr17:43022115 | 1,792 | 672 | 7,936 | — |
| chr17_43021932_T_C | chr17:43021932 | -1,792 | -688 | 5,632 | — |
| chr17_43021936_C_T | chr17:43021936 | -1,664 | -352 | 8,192 | — |
| chr17_43022205_C_G | chr17:43022205 | 1,664 | 144 | 6,912 | — |
| chr17_43021898_C_T | chr17:43021898 | -1,664 | -240 | -4,608 | — |
| chr17_43022087_A_G | chr17:43022087 | -1,536 | -384 | -7,680 | — |
| chr17_43022101_A_G | chr17:43022101 | -1,536 | -416 | -7,168 | — |
| chr17_43022062_C_G | chr17:43022062 | 1,536 | 368 | 6,400 | — |
| chr17_43022183_A_C | chr17:43022183 | 1,536 | -672 | -5,888 | — |
| chr17_43022211_C_T | chr17:43022211 | 1,536 | 496 | 5,632 | — |
| chr17_43021990_G_C | chr17:43021990 | -1,536 | -640 | -5,376 | — |
| chr17_43022134_C_T | chr17:43022134 | 1,536 | 752 | 4,864 | — |
| chr17_43021931_C_A | chr17:43021931 | -1,536 | 320 | 4,608 | — |
| chr17_43022117_G_T | chr17:43022117 | 1,408 | 1,344 | 7,424 | — |
| chr17_43022108_G_A | chr17:43022108 | 1,408 | 432 | 6,912 | 2.0e-5 |
| chr17_43021920_T_C | chr17:43021920 | -1,408 | -560 | -5,376 | — |
| chr17_43022109_G_T | chr17:43022109 | 1,408 | 368 | 4,608 | — |
| chr17_43022135_T_A | chr17:43022135 | -1,408 | -704 | -4,608 | — |
| chr17_43022191_C_T | chr17:43022191 | 1,280 | 736 | 7,424 | 1.0e-2 |
| chr17_43022220_A_G | chr17:43022220 | -1,280 | -640 | -7,168 | — |
| chr17_43022085_T_C | chr17:43022085 | -1,280 | -272 | -5,120 | — |
| chr17_43022171_A_C | chr17:43022171 | -1,152 | -304 | -6,144 | — |
| chr17_43022100_C_T | chr17:43022100 | 1,152 | 464 | 5,632 | — |
| chr17_43022216_T_G | chr17:43022216 | 1,024 | -816 | -7,936 | — |
| chr17_43022095_G_A | chr17:43022095 | 1,024 | 400 | 4,864 | 6.6e-6 |
| chr17_43022190_G_A | chr17:43022190 | 1,024 | 448 | 4,864 | — |
| chr17_43021931_C_G | chr17:43021931 | 960 | 832 | 10,496 | — |
| chr17_43022185_T_C | chr17:43022185 | -896 | -688 | -8,192 | — |
| chr17_43021921_A_C | chr17:43021921 | -896 | -688 | -4,864 | — |
| chr17_43022005_C_A | chr17:43022005 | -896 | 1,136 | 4,864 | — |
| chr17_43022223_C_T | chr17:43022223 | 896 | 864 | 4,864 | — |
| chr17_43022114_G_C | chr17:43022114 | 896 | 240 | 4,608 | — |
| chr17_43022225_G_A | chr17:43022225 | 768 | 1,040 | 8,192 | — |
| chr17_43022183_A_G | chr17:43022183 | -768 | -592 | -7,168 | — |
| chr17_43022187_G_A | chr17:43022187 | 768 | 176 | 5,888 | — |
| chr17_43022223_C_A | chr17:43022223 | -768 | 704 | 5,376 | — |
| chr17_43021937_T_C | chr17:43021937 | 768 | -256 | 5,120 | — |
| chr17_43021923_G_C | chr17:43021923 | -704 | -1,056 | -6,912 | — |
| chr17_43021931_C_T | chr17:43021931 | -704 | 336 | 6,912 | — |
| chr17_43021940_C_A | chr17:43021940 | 704 | 720 | 4,608 | — |
| chr17_43021906_G_T | chr17:43021906 | -672 | -672 | -9,600 | — |
| chr17_43022190_G_T | chr17:43022190 | -640 | 496 | 7,168 | — |
| chr17_43022225_G_T | chr17:43022225 | 640 | 848 | 7,168 | — |
| chr17_43022095_G_T | chr17:43022095 | 640 | 336 | 4,864 | — |
| chr17_43021900_T_C | chr17:43021900 | 608 | -448 | -5,376 | — |
| chr17_43021936_C_G | chr17:43021936 | -512 | -224 | 11,520 | — |
| chr17_43022216_T_C | chr17:43022216 | -512 | -560 | -5,888 | — |
| chr17_43022179_C_T | chr17:43022179 | 512 | 384 | 4,864 | — |
| chr17_43022217_C_A | chr17:43022217 | 512 | 208 | 4,864 | 4.6e-5 |
| chr17_43022066_C_T | chr17:43022066 | 512 | 432 | 4,608 | — |
| chr17_43022124_G_T | chr17:43022124 | 512 | 144 | 4,608 | — |
| chr17_43021926_A_T | chr17:43021926 | -448 | -752 | -7,168 | — |
| chr17_43021933_C_A | chr17:43021933 | 448 | -48 | 6,144 | — |
| chr17_43022101_A_C | chr17:43022101 | -384 | -320 | -6,656 | — |
| chr17_43022085_T_G | chr17:43022085 | -384 | -544 | -6,400 | — |
| chr17_43022096_G_T | chr17:43022096 | -384 | 576 | 6,144 | — |
| chr17_43022230_A_C | chr17:43022230 | 384 | -208 | -5,888 | — |
| chr17_43022229_G_C | chr17:43022229 | 384 | 1,072 | 5,632 | — |
| chr17_43022188_C_A | chr17:43022188 | -384 | 80 | 5,376 | — |
| chr17_43022222_G_A | chr17:43022222 | 384 | 720 | 4,608 | — |
| chr17_43021999_G_T | chr17:43021999 | -320 | 496 | -4,864 | — |
| chr17_43022180_A_C | chr17:43022180 | -256 | -752 | -9,728 | — |
| chr17_43022219_G_A | chr17:43022219 | -256 | 928 | 7,168 | 6.6e-6 |
| chr17_43022191_C_A | chr17:43022191 | 256 | 512 | 6,912 | — |
| chr17_43022226_C_T | chr17:43022226 | -256 | 576 | 6,400 | — |
| chr17_43022230_A_G | chr17:43022230 | 256 | 0 | -5,120 | — |
| chr17_43022075_A_T | chr17:43022075 | 256 | 432 | 4,864 | — |
| chr17_43021923_G_T | chr17:43021923 | -192 | -544 | -4,352 | — |
| chr17_43022090_T_C | chr17:43022090 | 128 | -352 | -6,400 | — |
| chr17_43022163_T_C | chr17:43022163 | 128 | -384 | -6,400 | — |
| chr17_43021937_T_A | chr17:43021937 | -64 | -112 | 5,376 | 6.6e-6 |
| chr17_43022229_G_A | chr17:43022229 | 0 | 1,024 | 5,120 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.