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XAF1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near XAF1
chr17:6,655,446..6,875,645, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_6683366_A_G | chr17:6683366 | -1.000 | -1.000 | -1.000 | 0.0020% |
| chr17_6657305_T_C | chr17:6657305 | 0.045 | 0.355 | 1.000 | <0.001% |
| chr17_6683280_T_G | chr17:6683280 | -0.827 | -0.936 | -0.503 | 0.0013% |
| chr17_6677254_T_G | chr17:6677254 | -0.746 | -0.634 | -1.000 | 0.0013% |
| chr17_6700126_A_T | chr17:6700126 | 0.539 | 0.559 | 0.180 | — |
| chr17_6657049_C_G | chr17:6657049 | 0.191 | 0.163 | 1.000 | <0.001% |
| chr17_6666196_C_T | chr17:6666196 | -0.670 | -0.010 | -0.039 | <0.001% |
| chr17_6677259_C_A | chr17:6677259 | -0.652 | -0.565 | -0.686 | 0.805% |
| chr17_6677307_G_A | chr17:6677307 | -0.623 | -0.502 | -0.752 | 0.016% |
| chr17_6700098_C_G | chr17:6700098 | 0.600 | 0.048 | 0.170 | <0.001% |
| chr17_6677241_G_A | chr17:6677241 | 0.577 | 0.401 | 0.451 | 0.804% |
| chr17_6677195_G_T | chr17:6677195 | -0.567 | -0.559 | -0.608 | 0.0013% |
| chr17_6683303_C_A | chr17:6683303 | -0.563 | -0.527 | -0.444 | 0.0020% |
| chr17_6657247_C_G | chr17:6657247 | 0.091 | 0.366 | 0.866 | 0.061% |
| chr17_6683382_G_C | chr17:6683382 | -0.540 | -0.546 | -0.451 | <0.001% |
| chr17_6700114_A_G | chr17:6700114 | 0.430 | 0.388 | 0.320 | — |
| chr17_6666232_G_C | chr17:6666232 | 0.532 | 0.179 | 0.190 | <0.001% |
| chr17_6683344_A_G | chr17:6683344 | -0.515 | -0.527 | -0.425 | 0.0020% |
| chr17_6677349_G_T | chr17:6677349 | 0.509 | 0.431 | 0.458 | 0.807% |
| chr17_6683390_C_T | chr17:6683390 | -0.501 | -0.527 | -0.431 | 0.0020% |
| chr17_6657202_T_A | chr17:6657202 | 0.154 | 0.165 | 0.788 | <0.001% |
| chr17_6657213_G_T | chr17:6657213 | 0.209 | 0.150 | 0.788 | <0.001% |
| chr17_6666223_A_C | chr17:6666223 | -0.488 | -0.169 | -0.118 | 0.0020% |
| chr17_6683344_A_C | chr17:6683344 | -0.480 | -0.642 | -0.346 | <0.001% |
| chr17_6677265_C_T | chr17:6677265 | -0.468 | -0.379 | -0.529 | 0.0072% |
| chr17_6677274_T_C | chr17:6677274 | -0.460 | -0.433 | -0.471 | 0.244% |
| chr17_6666221_G_T | chr17:6666221 | -0.459 | -0.150 | -0.216 | 0.0013% |
| chr17_6700115_A_C | chr17:6700115 | 0.352 | 0.252 | 0.438 | — |
| chr17_6677201_C_T | chr17:6677201 | -0.435 | -0.364 | -0.471 | 0.810% |
| chr17_6700115_A_T | chr17:6700115 | 0.344 | 0.257 | 0.011 | — |
| chr17_6677248_A_T | chr17:6677248 | 0.427 | 0.342 | 0.444 | 0.0013% |
| chr17_6666457_C_T | chr17:6666457 | -0.424 | -0.364 | -0.484 | 0.0026% |
| chr17_6666457_C_A | chr17:6666457 | -0.402 | -0.351 | -0.425 | <0.001% |
| chr17_6677293_C_G | chr17:6677293 | 0.379 | 0.332 | 0.366 | <0.001% |
| chr17_6700123_C_A | chr17:6700123 | -0.302 | -0.292 | -0.163 | — |
| chr17_6677198_G_A | chr17:6677198 | -0.373 | -0.347 | -0.464 | 0.101% |
| chr17_6677185_G_A | chr17:6677185 | -0.365 | -0.249 | -0.438 | 0.0013% |
| chr17_6677215_A_T | chr17:6677215 | -0.359 | -0.272 | -0.327 | 0.0090% |
| chr17_6666474_C_T | chr17:6666474 | 0.356 | 0.281 | 0.346 | <0.001% |
| chr17_6677757_G_A | chr17:6677757 | 0.334 | 0.399 | 0.373 | <0.001% |
| chr17_6666204_G_T | chr17:6666204 | -0.330 | 0.000 | -0.046 | <0.001% |
| chr17_6657207_C_G | chr17:6657207 | 0.135 | 0.104 | 0.507 | <0.001% |
| chr17_6677349_G_A | chr17:6677349 | 0.315 | 0.286 | 0.314 | 0.0020% |
| chr17_6683894_T_C | chr17:6683894 | -0.070 | -0.163 | -0.497 | <0.001% |
| chr17_6657302_A_C | chr17:6657302 | -0.039 | 0.029 | 0.493 | <0.001% |
| chr17_6666227_C_G | chr17:6666227 | 0.309 | 0.010 | 0.078 | 0.0013% |
| chr17_6666227_C_T | chr17:6666227 | 0.300 | 0.153 | 0.072 | <0.001% |
| chr17_6666229_G_A | chr17:6666229 | -0.299 | -0.121 | -0.124 | 0.0053% |
| chr17_6700050_C_A | chr17:6700050 | 0.299 | 0.355 | 0.052 | <0.001% |
| chr17_6676965_C_T | chr17:6676965 | 0.297 | 0.182 | 0.137 | <0.001% |
| chr17_6656974_G_T | chr17:6656974 | 0.090 | 0.022 | 0.469 | <0.001% |
| chr17_6666453_T_C | chr17:6666453 | -0.295 | -0.204 | -0.216 | <0.001% |
| chr17_6677142_G_T | chr17:6677142 | -0.291 | -0.233 | -0.353 | 0.0013% |
| chr17_6700061_G_A | chr17:6700061 | 0.264 | 0.256 | 0.052 | 10.4% |
| chr17_6666130_C_A | chr17:6666130 | 0.262 | -0.013 | 0.039 | <0.001% |
| chr17_6700113_T_G | chr17:6700113 | 0.208 | 0.217 | 0.191 | <0.001% |
| chr17_6657246_C_T | chr17:6657246 | 0.099 | 0.276 | 0.412 | 0.0020% |
| chr17_6657153_C_T | chr17:6657153 | 0.153 | 0.180 | 0.405 | <0.001% |
| chr17_6657369_A_T | chr17:6657369 | -0.144 | -0.236 | -0.405 | <0.001% |
| chr17_6700117_T_C | chr17:6700117 | 0.202 | 0.207 | 0.118 | — |
| chr17_6700122_G_T | chr17:6700122 | -0.202 | -0.176 | -0.169 | 0.0013% |
| chr17_6666197_A_G | chr17:6666197 | -0.245 | -0.035 | 0.013 | <0.001% |
| chr17_6700115_A_G | chr17:6700115 | 0.190 | 0.126 | 0.163 | — |
| chr17_6677049_G_C | chr17:6677049 | 0.235 | 0.166 | 0.248 | 0.0033% |
| chr17_6666131_C_G | chr17:6666131 | 0.234 | -0.061 | 0.000 | <0.001% |
| chr17_6677299_C_T | chr17:6677299 | -0.231 | -0.190 | -0.235 | 0.0020% |
| chr17_6666443_T_C | chr17:6666443 | -0.228 | -0.109 | -0.176 | <0.001% |
| chr17_6657445_C_G | chr17:6657445 | -0.029 | -0.120 | -0.359 | 54.2% |
| chr17_6666456_A_T | chr17:6666456 | -0.226 | -0.173 | -0.320 | <0.001% |
| chr17_6666138_A_T | chr17:6666138 | 0.224 | 0.045 | 0.046 | 0.0053% |
| chr17_6666234_G_A | chr17:6666234 | 0.222 | 0.048 | 0.085 | <0.001% |
| chr17_6657281_G_A | chr17:6657281 | 0.035 | -0.367 | 0.346 | <0.001% |
| chr17_6677577_T_C | chr17:6677577 | -0.029 | -0.006 | 0.346 | 0.041% |
| chr17_6677348_A_T | chr17:6677348 | 0.216 | 0.168 | 0.196 | 0.0013% |
| chr17_6683382_G_A | chr17:6683382 | -0.216 | -0.268 | -0.216 | <0.001% |
| chr17_6700125_G_A | chr17:6700125 | -0.172 | -0.116 | -0.140 | — |
| chr17_6666128_C_T | chr17:6666128 | 0.215 | 0.000 | -0.007 | <0.001% |
| chr17_6677258_C_T | chr17:6677258 | -0.208 | -0.176 | -0.144 | <0.001% |
| chr17_6683385_T_C | chr17:6683385 | 0.208 | 0.316 | 0.216 | <0.001% |
| chr17_6700122_G_C | chr17:6700122 | -0.162 | -0.176 | -0.079 | — |
| chr17_6657280_C_T | chr17:6657280 | -0.038 | -0.310 | 0.320 | <0.001% |
| chr17_6677651_C_A | chr17:6677651 | 0.095 | 0.070 | 0.320 | <0.001% |
| chr17_6683430_A_G | chr17:6683430 | 0.202 | 0.051 | 0.046 | <0.001% |
| chr17_6700070_T_G | chr17:6700070 | -0.202 | -0.256 | 0.033 | <0.001% |
| chr17_6666335_G_A | chr17:6666335 | -0.201 | -0.061 | -0.176 | <0.001% |
| chr17_6683287_C_T | chr17:6683287 | -0.200 | -0.217 | -0.183 | 0.0033% |
| chr17_6656872_C_A | chr17:6656872 | 0.036 | 0.074 | 0.315 | 0.0020% |
| chr17_6677315_C_T | chr17:6677315 | -0.198 | -0.192 | -0.314 | <0.001% |
| chr17_6700024_G_C | chr17:6700024 | 0.120 | 0.613 | 0.111 | <0.001% |
| chr17_6700127_G_A | chr17:6700127 | -0.156 | -0.131 | -0.124 | — |
| chr17_6657216_G_A | chr17:6657216 | 0.186 | 0.214 | 0.307 | <0.001% |
| chr17_6683367_T_C | chr17:6683367 | -0.194 | -0.169 | -0.144 | 0.073% |
| chr17_6666202_C_T | chr17:6666202 | -0.192 | -0.038 | -0.039 | <0.001% |
| chr17_6677325_A_G | chr17:6677325 | 0.192 | 0.166 | 0.190 | 0.0033% |
| chr17_6700124_T_C | chr17:6700124 | 0.149 | 0.212 | 0.163 | <0.001% |
| chr17_6656855_G_C | chr17:6656855 | 0.038 | 0.109 | 0.292 | 0.0020% |
| chr17_6656969_A_C | chr17:6656969 | 0.064 | 0.040 | 0.292 | <0.001% |
| chr17_6700114_A_T | chr17:6700114 | 0.146 | 0.171 | 0.090 | — |
| chr17_6677355_C_T | chr17:6677355 | -0.181 | -0.134 | -0.248 | 0.013% |
| chr17_6677072_G_T | chr17:6677072 | -0.171 | -0.123 | -0.281 | <0.001% |
| chr17_6677621_G_T | chr17:6677621 | -0.006 | -0.021 | 0.281 | <0.001% |
| chr17_6683312_G_A | chr17:6683312 | -0.177 | -0.073 | -0.144 | 0.0026% |
| chr17_6684183_G_C | chr17:6684183 | 0.175 | 0.371 | 0.281 | 0.0046% |
| chr17_6700116_C_T | chr17:6700116 | -0.141 | -0.134 | -0.096 | — |
| chr17_6666377_T_A | chr17:6666377 | 0.176 | 0.118 | 0.203 | 0.0013% |
| chr17_6677194_G_C | chr17:6677194 | -0.173 | -0.262 | -0.150 | 0.0020% |
| chr17_6657145_G_A | chr17:6657145 | 0.100 | 0.068 | 0.273 | <0.001% |
| chr17_6700126_A_C | chr17:6700126 | 0.136 | 0.196 | 0.157 | — |
| chr17_6657443_T_G | chr17:6657443 | -0.041 | -0.091 | -0.268 | <0.001% |
| chr17_6677356_G_A | chr17:6677356 | -0.169 | -0.077 | -0.170 | 0.0020% |
| chr17_6677637_T_C | chr17:6677637 | 0.014 | -0.002 | 0.268 | <0.001% |
| chr17_6683274_G_A | chr17:6683274 | -0.167 | -0.192 | -0.124 | 0.0020% |
| chr17_6666132_C_G | chr17:6666132 | 0.166 | -0.083 | 0.013 | 0.0013% |
| chr17_6677286_C_T | chr17:6677286 | -0.165 | -0.155 | -0.235 | <0.001% |
| chr17_6683372_T_C | chr17:6683372 | -0.163 | -0.329 | -0.078 | 0.0013% |
| chr17_6656850_G_C | chr17:6656850 | 0.029 | 0.088 | 0.257 | 0.0046% |
| chr17_6666385_C_T | chr17:6666385 | -0.162 | -0.121 | -0.176 | <0.001% |
| chr17_6657219_A_G | chr17:6657219 | 0.065 | 0.067 | 0.255 | <0.001% |
| chr17_6666312_C_T | chr17:6666312 | -0.161 | -0.077 | -0.137 | 0.0013% |
| chr17_6669225_T_G | chr17:6669225 | -0.023 | -0.027 | 0.255 | <0.001% |
| chr17_6683435_G_A | chr17:6683435 | -0.161 | -0.160 | -0.137 | 39.6% |
| chr17_6657374_G_A | chr17:6657374 | 0.026 | 0.013 | 0.248 | 54.1% |
| chr17_6683351_T_C | chr17:6683351 | 0.029 | -0.019 | -0.248 | 0.0013% |
| chr17_6700124_T_A | chr17:6700124 | 0.125 | 0.237 | 0.084 | — |
| chr17_6683315_G_A | chr17:6683315 | -0.155 | -0.131 | -0.157 | 0.0020% |
| chr17_6700041_C_T | chr17:6700041 | -0.155 | -0.083 | -0.092 | <0.001% |
| chr17_6700120_G_A | chr17:6700120 | -0.123 | -0.096 | -0.112 | — |
| chr17_6700121_A_T | chr17:6700121 | 0.123 | 0.065 | 0.101 | — |
| chr17_6657276_C_T | chr17:6657276 | 0.084 | 0.091 | 0.242 | 54.1% |
| chr17_6683267_T_A | chr17:6683267 | -0.153 | -0.230 | -0.092 | <0.001% |
| chr17_6657196_C_A | chr17:6657196 | -0.024 | -0.018 | 0.239 | <0.001% |
| chr17_6700102_G_A | chr17:6700102 | -0.151 | -0.102 | -0.105 | <0.001% |
| chr17_6700123_C_T | chr17:6700123 | -0.120 | -0.065 | -0.135 | — |
| chr17_6656974_G_C | chr17:6656974 | 0.039 | 0.042 | 0.237 | <0.001% |
| chr17_6657316_G_A | chr17:6657316 | -0.047 | 0.056 | 0.235 | 0.0013% |
| chr17_6677595_C_T | chr17:6677595 | 0.148 | 0.046 | 0.137 | 0.0072% |
| chr17_6700121_A_C | chr17:6700121 | 0.118 | 0.151 | 0.112 | — |
| chr17_6700126_A_G | chr17:6700126 | 0.118 | 0.025 | 0.101 | — |
| chr17_6657172_C_G | chr17:6657172 | 0.048 | 0.047 | 0.232 | 0.0013% |
| chr17_6666175_C_T | chr17:6666175 | -0.146 | 0.035 | -0.013 | 0.0013% |
| chr17_6677228_A_G | chr17:6677228 | 0.146 | 0.176 | 0.203 | 0.165% |
| chr17_6677294_C_T | chr17:6677294 | 0.146 | 0.129 | 0.124 | <0.001% |
| chr17_6677319_G_T | chr17:6677319 | -0.146 | -0.101 | -0.157 | 0.0039% |
| chr17_6657457_G_T | chr17:6657457 | 0.027 | 0.013 | 0.229 | <0.001% |
| chr17_6666211_A_G | chr17:6666211 | 0.144 | 0.035 | 0.092 | 15.3% |
| chr17_6657273_G_C | chr17:6657273 | 0.074 | -0.117 | 0.222 | <0.001% |
| chr17_6666249_C_A | chr17:6666249 | -0.140 | -0.080 | -0.176 | <0.001% |
| chr17_6676489_C_A | chr17:6676489 | 0.037 | 0.024 | 0.222 | 0.0013% |
| chr17_6683231_G_T | chr17:6683231 | -0.093 | -0.435 | -0.111 | <0.001% |
| chr17_6700117_T_A | chr17:6700117 | 0.111 | 0.086 | 0.045 | — |
| chr17_6656851_G_A | chr17:6656851 | 0.026 | 0.078 | 0.221 | 0.0026% |
| chr17_6657011_G_A | chr17:6657011 | 0.029 | 0.038 | 0.221 | <0.001% |
| chr17_6677184_T_C | chr17:6677184 | 0.136 | 0.088 | 0.124 | 2.92% |
| chr17_6677491_G_C | chr17:6677491 | -0.136 | -0.117 | -0.105 | <0.001% |
| chr17_6683231_G_A | chr17:6683231 | -0.099 | -0.422 | -0.111 | <0.001% |
| chr17_6700118_C_G | chr17:6700118 | 0.108 | 0.126 | 0.034 | — |
| chr17_6657170_C_G | chr17:6657170 | 0.043 | 0.037 | 0.212 | <0.001% |
| chr17_6677597_A_G | chr17:6677597 | 0.134 | 0.016 | 0.209 | <0.001% |
| chr17_6657228_G_T | chr17:6657228 | 0.104 | -0.011 | 0.209 | <0.001% |
| chr17_6677243_C_T | chr17:6677243 | 0.132 | 0.289 | 0.072 | 0.0039% |
| chr17_6677167_A_G | chr17:6677167 | 0.130 | 0.081 | 0.183 | 0.0013% |
| chr17_6683879_C_T | chr17:6683879 | 0.062 | 0.099 | 0.203 | <0.001% |
| chr17_6657132_T_C | chr17:6657132 | 0.059 | 0.071 | 0.199 | <0.001% |
| chr17_6666233_A_G | chr17:6666233 | 0.126 | 0.188 | 0.137 | <0.001% |
| chr17_6666102_G_A | chr17:6666102 | -0.124 | 0.000 | -0.124 | 0.0092% |
| chr17_6666417_C_T | chr17:6666417 | -0.124 | -0.086 | -0.131 | <0.001% |
| chr17_6677670_C_T | chr17:6677670 | 0.049 | 0.037 | 0.196 | <0.001% |
| chr17_6700120_G_C | chr17:6700120 | 0.098 | 0.050 | 0.017 | — |
| chr17_6700122_G_A | chr17:6700122 | -0.098 | -0.121 | -0.056 | — |
| chr17_6666309_A_G | chr17:6666309 | 0.123 | -0.013 | 0.052 | <0.001% |
| chr17_6666395_C_A | chr17:6666395 | 0.122 | 0.073 | 0.026 | <0.001% |
| chr17_6657372_T_G | chr17:6657372 | -0.085 | -0.091 | -0.190 | 54.2% |
| chr17_6666152_T_A | chr17:6666152 | -0.120 | -0.048 | -0.098 | <0.001% |
| chr17_6677404_G_T | chr17:6677404 | 0.074 | 0.085 | 0.190 | <0.001% |
| chr17_6677558_G_T | chr17:6677558 | -0.120 | -0.013 | -0.157 | 0.0020% |
| chr17_6684189_A_G | chr17:6684189 | -0.039 | -0.105 | -0.190 | <0.001% |
| chr17_6700119_A_C | chr17:6700119 | -0.095 | -0.086 | 0.011 | — |
| chr17_6666248_G_A | chr17:6666248 | -0.119 | -0.026 | -0.072 | 0.914% |
| chr17_6669262_T_A | chr17:6669262 | 0.072 | -0.032 | 0.183 | <0.001% |
| chr17_6700025_C_A | chr17:6700025 | -0.115 | -0.121 | -0.072 | <0.001% |
| chr17_6656857_G_A | chr17:6656857 | 0.019 | 0.060 | 0.180 | 0.0013% |
| chr17_6683195_G_T | chr17:6683195 | -0.113 | -0.105 | -0.118 | <0.001% |
| chr17_6700125_G_T | chr17:6700125 | -0.090 | -0.065 | -0.045 | — |
| chr17_6657232_G_A | chr17:6657232 | 0.074 | 0.144 | 0.176 | 0.0020% |
| chr17_6676512_C_T | chr17:6676512 | 0.012 | -0.027 | 0.176 | <0.001% |
| chr17_6677158_C_T | chr17:6677158 | -0.111 | -0.075 | -0.137 | 0.155% |
| chr17_6677600_G_T | chr17:6677600 | -0.111 | -0.016 | 0.033 | 0.0026% |
| chr17_6666250_G_T | chr17:6666250 | 0.110 | 0.045 | 0.026 | 0.0013% |
| chr17_6657225_C_G | chr17:6657225 | 0.064 | 0.157 | 0.173 | <0.001% |
| chr17_6700113_T_A | chr17:6700113 | 0.087 | 0.055 | 0.062 | — |
| chr17_6656859_G_A | chr17:6656859 | 0.016 | 0.063 | 0.172 | <0.001% |
| chr17_6666210_C_A | chr17:6666210 | 0.108 | 0.006 | -0.039 | 0.0026% |
| chr17_6700052_A_G | chr17:6700052 | -0.108 | -0.128 | -0.039 | 0.0013% |
| chr17_6666200_C_G | chr17:6666200 | 0.037 | 0.169 | 0.170 | 0.0020% |
| chr17_6666337_A_G | chr17:6666337 | 0.107 | 0.042 | 0.131 | 0.127% |
| chr17_6666520_G_A | chr17:6666520 | -0.101 | -0.077 | -0.170 | <0.001% |
| chr17_6676515_C_G | chr17:6676515 | 0.043 | -0.030 | 0.170 | <0.001% |
| chr17_6676973_G_A | chr17:6676973 | -0.093 | -0.077 | -0.170 | 0.0085% |
| chr17_6677342_C_T | chr17:6677342 | -0.107 | -0.101 | -0.131 | <0.001% |
| chr17_6683476_C_T | chr17:6683476 | -0.107 | -0.157 | -0.118 | 0.062% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.