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LOC100288175

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near LOC100288175

chr1:959,733..1,166,453, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_961229_C_T	chr1:961229	0.518	0.173	1.000	<0.001%
chr1_960580_C_G	chr1:960580	-0.391	-0.254	-1.000	0.0026%
chr1_960815_G_T	chr1:960815	0.594	0.034	1.000	<0.001%
chr1_966368_A_T	chr1:966368	0.313	0.217	0.842	—
chr1_960815_G_A	chr1:960815	0.479	0.021	0.864	0.0013%
chr1_966393_G_C	chr1:966393	0.348	-0.010	0.094	—
chr1_960537_G_T	chr1:960537	-0.431	-0.036	-0.286	0.049%
chr1_966231_G_C	chr1:966231	0.131	0.050	0.596	—
chr1_961000_G_T	chr1:961000	0.379	0.069	0.654	<0.001%
chr1_961225_C_T	chr1:961225	0.055	0.054	0.654	<0.001%
chr1_966384_T_C	chr1:966384	0.060	-0.030	0.585	—
chr1_961254_C_G	chr1:961254	-0.171	-0.152	-0.637	0.0013%
chr1_966383_G_A	chr1:966383	0.321	-0.168	0.468	—
chr1_966390_C_G	chr1:966390	0.313	-0.006	-0.175	—
chr1_966230_G_C	chr1:966230	0.068	-0.003	0.550	—
chr1_966367_G_C	chr1:966367	-0.096	-0.064	-0.526	—
chr1_960816_T_G	chr1:960816	0.333	0.014	0.583	0.0048%
chr1_961175_G_A	chr1:961175	0.037	0.055	0.575	0.0013%
chr1_960473_C_G	chr1:960473	-0.205	-0.066	-0.573	<0.001%
chr1_966381_A_C	chr1:966381	0.184	-0.010	0.503	—
chr1_961181_G_T	chr1:961181	0.037	0.048	0.549	0.0026%
chr1_966231_G_A	chr1:966231	0.116	0.040	0.491	—
chr1_961172_G_A	chr1:961172	0.053	0.050	0.539	0.0013%
chr1_966367_G_T	chr1:966367	-0.129	-0.055	-0.480	—
chr1_966371_T_G	chr1:966371	0.114	0.033	0.480	—
chr1_966384_T_A	chr1:966384	-0.018	-0.058	0.480	—
chr1_966179_G_A	chr1:966179	0.122	0.043	0.523	71.7%
chr1_961190_G_T	chr1:961190	0.054	0.044	0.516	0.0013%
chr1_961309_A_G	chr1:961309	-0.020	-0.035	-0.510	<0.001%
chr1_966382_G_C	chr1:966382	-0.007	-0.065	0.456	—
chr1_961215_C_A	chr1:961215	-0.004	0.053	0.497	<0.001%
chr1_966321_G_A	chr1:966321	-0.081	-0.065	-0.444	—
chr1_960803_G_C	chr1:960803	0.040	-0.009	0.482	<0.001%
chr1_961224_C_T	chr1:961224	0.013	0.052	0.477	<0.001%
chr1_966230_G_A	chr1:966230	0.088	0.030	0.421	—
chr1_966385_A_G	chr1:966385	-0.214	-0.126	-0.421	<0.001%
chr1_966281_G_C	chr1:966281	0.232	0.073	0.164	—
chr1_961135_C_T	chr1:961135	0.049	0.032	0.454	0.0020%
chr1_961131_C_T	chr1:961131	0.024	0.040	0.444	0.0027%
chr1_961182_C_T	chr1:961182	0.047	0.040	0.444	0.0013%
chr1_966231_G_T	chr1:966231	0.104	0.038	0.398	—
chr1_960887_G_A	chr1:960887	0.131	0.026	0.443	<0.001%
chr1_961306_C_A	chr1:961306	0.019	0.049	0.435	0.0033%
chr1_961278_G_T	chr1:961278	0.000	0.054	0.428	<0.001%
chr1_960803_G_T	chr1:960803	-0.075	-0.012	0.426	<0.001%
chr1_961228_C_T	chr1:961228	0.035	0.037	0.425	0.0013%
chr1_966232_G_A	chr1:966232	0.056	-0.003	0.374	0.0026%
chr1_966232_G_C	chr1:966232	0.045	-0.011	0.374	—
chr1_961186_C_T	chr1:961186	0.028	0.031	0.412	<0.001%
chr1_961245_G_A	chr1:961245	0.053	0.048	0.405	0.0059%
chr1_966371_T_A	chr1:966371	0.071	0.020	0.363	—
chr1_966381_A_T	chr1:966381	0.007	-0.063	0.363	—
chr1_960826_G_A	chr1:960826	0.112	0.034	0.399	0.023%
chr1_966382_G_A	chr1:966382	-0.199	-0.162	-0.070	—
chr1_959914_G_C	chr1:959914	0.064	0.010	0.386	0.0053%
chr1_961289_G_A	chr1:961289	0.036	0.027	0.386	<0.001%
chr1_960604_G_A	chr1:960604	0.207	0.027	0.384	0.0013%
chr1_961148_G_T	chr1:961148	0.118	0.031	0.382	0.0026%
chr1_961011_T_C	chr1:961011	-0.024	-0.027	-0.381	0.0013%
chr1_966238_G_T	chr1:966238	0.180	0.065	-0.339	—
chr1_966388_G_C	chr1:966388	0.154	0.055	0.339	—
chr1_961038_G_A	chr1:961038	0.079	0.030	0.376	0.0013%
chr1_961040_G_A	chr1:961040	0.055	0.027	0.376	<0.001%
chr1_961209_C_T	chr1:961209	0.016	0.028	0.373	<0.001%
chr1_961057_C_A	chr1:961057	-0.012	0.029	0.368	<0.001%
chr1_961023_G_A	chr1:961023	0.096	0.052	0.366	<0.001%
chr1_966381_A_G	chr1:966381	-0.012	-0.057	0.327	—
chr1_966383_G_C	chr1:966383	0.003	-0.084	0.327	0.0013%
chr1_966385_A_C	chr1:966385	0.149	0.010	0.327	—
chr1_966387_G_T	chr1:966387	0.132	0.110	0.327	—
chr1_961201_T_C	chr1:961201	0.000	-0.023	-0.359	<0.001%
chr1_966229_G_C	chr1:966229	0.182	0.078	0.187	<0.001%
chr1_960744_C_T	chr1:960744	0.056	0.035	0.358	0.0013%
chr1_960535_G_C	chr1:960535	-0.224	-0.026	0.070	0.0099%
chr1_961167_C_T	chr1:961167	0.019	0.028	0.353	0.0013%
chr1_966341_C_A	chr1:966341	-0.162	-0.047	-0.316	—
chr1_966366_A_T	chr1:966366	0.179	0.194	0.304	—
chr1_966378_C_G	chr1:966378	0.179	0.179	0.234	—
chr1_960970_C_T	chr1:960970	0.036	0.024	0.351	<0.001%
chr1_960526_G_A	chr1:960526	-0.221	-0.015	-0.126	<0.001%
chr1_960774_G_T	chr1:960774	0.079	0.020	0.348	<0.001%
chr1_961200_C_T	chr1:961200	0.021	0.036	0.346	0.0013%
chr1_966352_A_G	chr1:966352	-0.175	-0.065	-0.281	—
chr1_960714_C_T	chr1:960714	0.046	0.030	0.345	0.0020%
chr1_960740_A_G	chr1:960740	-0.114	-0.036	-0.340	<0.001%
chr1_961173_C_T	chr1:961173	0.020	0.034	0.340	<0.001%
chr1_966237_G_T	chr1:966237	0.142	0.067	-0.304	—
chr1_961168_G_T	chr1:961168	0.019	0.033	0.337	<0.001%
chr1_961261_G_T	chr1:961261	0.015	0.038	0.333	<0.001%
chr1_961134_G_A	chr1:961134	0.014	0.034	0.330	0.014%
chr1_961199_G_T	chr1:961199	0.012	0.032	0.327	0.0013%
chr1_961206_C_T	chr1:961206	0.013	0.022	0.327	<0.001%
chr1_961208_C_G	chr1:961208	-0.025	-0.033	-0.327	<0.001%
chr1_966238_G_C	chr1:966238	0.166	0.060	-0.129	—
chr1_966365_G_A	chr1:966365	0.139	0.116	0.292	—
chr1_966366_A_C	chr1:966366	0.146	0.093	0.292	—
chr1_961158_G_A	chr1:961158	0.024	0.023	0.320	<0.001%
chr1_961174_T_C	chr1:961174	-0.012	-0.027	-0.320	<0.001%
chr1_960675_C_T	chr1:960675	0.047	0.030	0.317	<0.001%
chr1_961184_C_T	chr1:961184	0.043	0.023	0.317	0.011%
chr1_960708_C_A	chr1:960708	-0.003	0.033	0.315	<0.001%
chr1_959902_C_T	chr1:959902	0.012	0.015	0.314	<0.001%
chr1_960851_C_G	chr1:960851	0.166	-0.003	0.314	<0.001%
chr1_960907_G_A	chr1:960907	0.066	0.032	0.314	0.0013%
chr1_961219_C_T	chr1:961219	-0.002	0.031	0.314	0.0013%
chr1_966278_T_C	chr1:966278	0.046	0.000	0.281	—
chr1_966356_C_T	chr1:966356	-0.121	-0.063	-0.281	<0.001%
chr1_960542_G_A	chr1:960542	0.123	0.059	0.310	0.011%
chr1_961112_A_G	chr1:961112	-0.015	-0.035	-0.310	<0.001%
chr1_961281_C_T	chr1:961281	0.026	0.037	0.310	<0.001%
chr1_960773_C_T	chr1:960773	0.067	0.018	0.309	<0.001%
chr1_961188_T_C	chr1:961188	-0.011	-0.022	-0.307	<0.001%
chr1_961198_G_A	chr1:961198	0.022	0.031	0.307	<0.001%
chr1_961318_C_T	chr1:961318	0.025	0.027	0.307	<0.001%
chr1_961286_C_A	chr1:961286	0.018	0.018	0.304	0.0046%
chr1_966391_C_G	chr1:966391	0.154	-0.030	0.140	—
chr1_960444_G_C	chr1:960444	0.088	0.056	0.301	<0.001%
chr1_961101_A_G	chr1:961101	-0.023	-0.022	-0.301	0.0013%
chr1_961212_G_A	chr1:961212	-0.001	0.024	0.301	0.0020%
chr1_966237_G_A	chr1:966237	0.114	0.063	-0.269	—
chr1_966239_A_T	chr1:966239	-0.007	-0.013	-0.269	—
chr1_966368_A_G	chr1:966368	-0.008	0.005	0.269	—
chr1_960905_G_T	chr1:960905	0.044	0.034	0.299	<0.001%
chr1_960509_A_T	chr1:960509	0.007	0.055	0.297	3.15%
chr1_960705_C_T	chr1:960705	0.077	0.030	0.297	<0.001%
chr1_960587_A_G	chr1:960587	-0.027	-0.030	-0.296	<0.001%
chr1_960961_C_T	chr1:960961	0.037	0.025	0.296	<0.001%
chr1_959900_G_A	chr1:959900	0.012	0.013	0.294	<0.001%
chr1_960533_G_A	chr1:960533	-0.186	-0.020	-0.060	0.0013%
chr1_961128_C_T	chr1:961128	0.028	0.026	0.294	<0.001%
chr1_961317_C_T	chr1:961317	0.002	0.022	0.294	0.0026%
chr1_966271_A_C	chr1:966271	0.149	0.030	0.070	—
chr1_960469_G_C	chr1:960469	0.101	-0.001	0.292	<0.001%
chr1_959888_C_T	chr1:959888	0.077	0.050	0.288	3.24%
chr1_960717_G_A	chr1:960717	-0.008	0.029	0.288	0.0020%
chr1_966224_T_C	chr1:966224	0.003	0.047	0.257	—
chr1_966232_G_T	chr1:966232	0.022	-0.025	0.257	—
chr1_966238_G_A	chr1:966238	0.109	0.058	-0.257	—
chr1_966345_C_T	chr1:966345	-0.055	-0.048	-0.257	0.090%
chr1_966377_G_T	chr1:966377	-0.111	-0.050	-0.257	—
chr1_960849_G_T	chr1:960849	0.000	0.020	0.287	0.0027%
chr1_960450_G_A	chr1:960450	0.123	0.047	0.284	0.066%
chr1_961146_G_A	chr1:961146	0.075	0.038	0.284	0.0013%
chr1_961152_T_G	chr1:961152	-0.007	-0.020	-0.284	0.0013%
chr1_961256_C_T	chr1:961256	0.028	0.034	0.284	<0.001%
chr1_960902_C_A	chr1:960902	0.002	0.023	0.283	<0.001%
chr1_960440_G_C	chr1:960440	0.102	0.030	0.281	5.07%
chr1_961294_C_T	chr1:961294	0.061	0.044	0.278	0.0013%
chr1_961048_G_C	chr1:961048	0.008	-0.016	-0.276	0.0013%
chr1_961063_G_T	chr1:961063	0.010	0.029	0.275	0.110%
chr1_966228_G_T	chr1:966228	0.139	0.060	-0.152	—
chr1_966230_G_T	chr1:966230	-0.035	-0.053	0.246	—
chr1_966276_G_C	chr1:966276	-0.083	-0.126	0.246	—
chr1_966278_T_G	chr1:966278	0.015	-0.008	0.246	—
chr1_966363_C_G	chr1:966363	-0.083	-0.055	-0.246	—
chr1_966382_G_T	chr1:966382	-0.060	-0.107	0.246	—
chr1_966383_G_T	chr1:966383	-0.015	-0.098	0.246	—
chr1_960603_C_T	chr1:960603	-0.172	0.005	-0.018	0.0033%
chr1_960646_G_T	chr1:960646	0.045	0.031	0.273	0.0026%
chr1_960609_G_C	chr1:960609	-0.171	-0.001	-0.103	<0.001%
chr1_960734_G_T	chr1:960734	0.042	0.020	0.271	0.0027%
chr1_961096_A_C	chr1:961096	-0.012	-0.022	-0.271	<0.001%
chr1_966229_G_T	chr1:966229	0.137	0.065	0.012	—
chr1_961309_A_T	chr1:961309	0.004	0.005	-0.268	<0.001%
chr1_960583_C_G	chr1:960583	0.000	-0.018	-0.265	<0.001%
chr1_960612_A_G	chr1:960612	0.027	-0.024	-0.265	0.0013%
chr1_960899_G_A	chr1:960899	0.061	0.028	0.265	<0.001%
chr1_961066_G_A	chr1:961066	0.047	0.015	0.265	0.0033%
chr1_966390_C_T	chr1:966390	0.134	0.146	0.023	—
chr1_960776_C_T	chr1:960776	0.058	0.019	0.261	0.0013%
chr1_961065_G_T	chr1:961065	0.034	0.018	0.261	<0.001%
chr1_961144_G_A	chr1:961144	0.022	0.040	0.261	0.0033%
chr1_961213_G_A	chr1:961213	-0.005	0.018	0.261	0.0020%
chr1_961337_C_T	chr1:961337	0.029	0.016	0.261	0.0020%
chr1_966384_T_G	chr1:966384	0.007	-0.121	0.234	—
chr1_960684_C_T	chr1:960684	0.022	0.025	0.260	<0.001%
chr1_960503_G_A	chr1:960503	-0.163	-0.027	-0.056	<0.001%
chr1_960883_G_A	chr1:960883	-0.016	0.040	0.258	0.0013%
chr1_966236_T_C	chr1:966236	0.131	0.063	-0.117	—
chr1_961129_G_A	chr1:961129	0.003	0.021	0.255	0.0013%
chr1_961138_C_T	chr1:961138	0.002	0.018	0.255	0.017%
chr1_961026_G_A	chr1:961026	0.047	0.035	0.253	<0.001%
chr1_960990_C_T	chr1:960990	0.019	0.021	0.249	0.0033%
chr1_959758_C_T	chr1:959758	0.016	0.011	0.248	<0.001%
chr1_961114_C_T	chr1:961114	0.001	0.022	0.248	0.0046%
chr1_966245_G_C	chr1:966245	-0.048	-0.040	-0.222	—
chr1_966336_C_A	chr1:966336	-0.056	-0.020	-0.222	—
chr1_966372_G_T	chr1:966372	0.002	0.018	0.222	—
chr1_966378_C_T	chr1:966378	0.126	0.101	0.164	<0.001%
chr1_966380_C_A	chr1:966380	0.025	0.000	0.222	—
chr1_960746_G_A	chr1:960746	0.000	0.021	0.247	0.0013%
chr1_960793_C_A	chr1:960793	0.034	0.026	0.247	<0.001%
chr1_961260_C_T	chr1:961260	-0.024	0.024	0.245	0.0026%
chr1_961095_C_T	chr1:961095	0.008	0.015	0.242	<0.001%
chr1_961280_C_T	chr1:961280	0.021	0.044	0.242	<0.001%
chr1_961355_T_G	chr1:961355	0.008	-0.018	-0.242	<0.001%
chr1_960715_C_A	chr1:960715	-0.038	0.016	0.240	<0.001%
chr1_960884_G_A	chr1:960884	-0.034	0.044	0.240	<0.001%
chr1_966228_G_A	chr1:966228	0.121	0.055	-0.164	0.0020%
chr1_966354_G_C	chr1:966354	0.121	0.063	0.211	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.