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LOC100288175
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LOC100288175
chr1:959,733..1,166,453, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_960815_G_T | chr1:960815 | 18,432 | 344 | 21,824 | 6.7e-6 |
| chr1_961229_C_T | chr1:961229 | 16,064 | 1,728 | 39,680 | 6.6e-6 |
| chr1_960815_G_A | chr1:960815 | 14,880 | 208 | 16,928 | 1.3e-5 |
| chr1_966393_G_C | chr1:966393 | 13,440 | -128 | 2,048 | — |
| chr1_960537_G_T | chr1:960537 | -13,376 | -356 | -5,600 | 4.9e-4 |
| chr1_966383_G_A | chr1:966383 | 12,416 | -2,128 | 10,240 | — |
| chr1_960580_C_G | chr1:960580 | -12,128 | -2,546 | -32,368 | 2.6e-5 |
| chr1_966368_A_T | chr1:966368 | 12,096 | 2,752 | 18,432 | — |
| chr1_966390_C_G | chr1:966390 | 12,096 | -80 | -3,840 | — |
| chr1_961000_G_T | chr1:961000 | 11,776 | 690 | 12,800 | 6.6e-6 |
| chr1_960816_T_G | chr1:960816 | 10,336 | 144 | 11,424 | 4.8e-5 |
| chr1_966281_G_C | chr1:966281 | 8,960 | 928 | 3,584 | — |
| chr1_966385_A_G | chr1:966385 | -8,256 | -1,600 | -9,216 | 6.6e-6 |
| chr1_966382_G_A | chr1:966382 | -7,680 | -2,064 | -1,536 | — |
| chr1_966381_A_C | chr1:966381 | 7,104 | -128 | 11,008 | — |
| chr1_966229_G_C | chr1:966229 | 7,040 | 992 | 4,096 | 6.6e-6 |
| chr1_966238_G_T | chr1:966238 | 6,976 | 832 | -7,424 | — |
| chr1_960535_G_C | chr1:960535 | -6,944 | -260 | 1,376 | 9.9e-5 |
| chr1_966366_A_T | chr1:966366 | 6,912 | 2,464 | 6,656 | — |
| chr1_966378_C_G | chr1:966378 | 6,912 | 2,272 | 5,120 | — |
| chr1_960526_G_A | chr1:960526 | -6,848 | -148 | -2,464 | 6.6e-6 |
| chr1_966352_A_G | chr1:966352 | -6,784 | -832 | -6,144 | — |
| chr1_960604_G_A | chr1:960604 | 6,432 | 274 | 7,520 | 1.3e-5 |
| chr1_966238_G_C | chr1:966238 | 6,400 | 768 | -2,816 | — |
| chr1_960473_C_G | chr1:960473 | -6,368 | -666 | -11,216 | 6.6e-6 |
| chr1_966341_C_A | chr1:966341 | -6,272 | -592 | -6,912 | — |
| chr1_966388_G_C | chr1:966388 | 5,952 | 704 | 7,424 | — |
| chr1_966391_C_G | chr1:966391 | 5,952 | -384 | 3,072 | — |
| chr1_966385_A_C | chr1:966385 | 5,760 | 128 | 7,168 | — |
| chr1_960533_G_A | chr1:960533 | -5,760 | -204 | -1,184 | 1.3e-5 |
| chr1_966271_A_C | chr1:966271 | 5,760 | 384 | 1,536 | — |
| chr1_966366_A_C | chr1:966366 | 5,632 | 1,184 | 6,400 | — |
| chr1_966237_G_T | chr1:966237 | 5,504 | 848 | -6,656 | — |
| chr1_966365_G_A | chr1:966365 | 5,376 | 1,472 | 6,400 | — |
| chr1_966228_G_T | chr1:966228 | 5,376 | 768 | -3,328 | — |
| chr1_960603_C_T | chr1:960603 | -5,344 | 50 | -352 | 3.3e-5 |
| chr1_960609_G_C | chr1:960609 | -5,312 | -6 | -2,016 | 6.6e-6 |
| chr1_966229_G_T | chr1:966229 | 5,312 | 832 | 256 | — |
| chr1_961254_C_G | chr1:961254 | -5,296 | -1,520 | -12,480 | 1.3e-5 |
| chr1_966390_C_T | chr1:966390 | 5,184 | 1,856 | 512 | — |
| chr1_960851_C_G | chr1:960851 | 5,152 | -26 | 6,144 | 6.7e-6 |
| chr1_966387_G_T | chr1:966387 | 5,120 | 1,392 | 7,168 | — |
| chr1_966231_G_C | chr1:966231 | 5,056 | 640 | 13,056 | — |
| chr1_960503_G_A | chr1:960503 | -5,056 | -274 | -1,088 | 6.6e-6 |
| chr1_966236_T_C | chr1:966236 | 5,056 | 800 | -2,560 | — |
| chr1_966367_G_T | chr1:966367 | -4,992 | -704 | -10,496 | — |
| chr1_966378_C_T | chr1:966378 | 4,864 | 1,280 | 3,584 | 6.6e-6 |
| chr1_966356_C_T | chr1:966356 | -4,672 | -800 | -6,144 | 6.6e-6 |
| chr1_966228_G_A | chr1:966228 | 4,672 | 704 | -3,584 | 2.0e-5 |
| chr1_966354_G_C | chr1:966354 | 4,672 | 800 | 4,608 | — |
| chr1_966231_G_A | chr1:966231 | 4,480 | 512 | 10,752 | — |
| chr1_966371_T_G | chr1:966371 | 4,416 | 416 | 10,496 | — |
| chr1_966237_G_A | chr1:966237 | 4,416 | 800 | -5,888 | — |
| chr1_966377_G_T | chr1:966377 | -4,288 | -640 | -5,632 | — |
| chr1_966238_G_A | chr1:966238 | 4,224 | 736 | -5,632 | — |
| chr1_960887_G_A | chr1:960887 | 4,064 | 258 | 8,672 | 6.6e-6 |
| chr1_966231_G_T | chr1:966231 | 4,032 | 480 | 8,704 | — |
| chr1_960542_G_A | chr1:960542 | 3,808 | 592 | 6,080 | 1.1e-4 |
| chr1_960450_G_A | chr1:960450 | 3,808 | 466 | 5,568 | 6.6e-4 |
| chr1_966179_G_A | chr1:966179 | 3,776 | 432 | 10,240 | 7.2e-1 |
| chr1_966367_G_C | chr1:966367 | -3,712 | -816 | -11,520 | — |
| chr1_961148_G_T | chr1:961148 | 3,648 | 312 | 7,488 | 2.6e-5 |
| chr1_960740_A_G | chr1:960740 | -3,552 | -364 | -6,656 | 6.7e-6 |
| chr1_960826_G_A | chr1:960826 | 3,488 | 344 | 7,808 | 2.3e-4 |
| chr1_966230_G_A | chr1:966230 | 3,392 | 384 | 9,216 | — |
| chr1_966276_G_C | chr1:966276 | -3,200 | -1,600 | 5,376 | — |
| chr1_966363_C_G | chr1:966363 | -3,200 | -704 | -5,376 | — |
| chr1_960440_G_C | chr1:960440 | 3,168 | 304 | 5,504 | 5.1e-2 |
| chr1_966321_G_A | chr1:966321 | -3,136 | -832 | -9,728 | — |
| chr1_960469_G_C | chr1:960469 | 3,136 | -12 | 5,728 | 6.6e-6 |
| chr1_961023_G_A | chr1:961023 | 2,976 | 516 | 7,168 | 6.6e-6 |
| chr1_966371_T_A | chr1:966371 | 2,752 | 256 | 7,936 | — |
| chr1_960444_G_C | chr1:960444 | 2,720 | 564 | 5,888 | 6.6e-6 |
| chr1_966230_G_C | chr1:966230 | 2,624 | -32 | 12,032 | — |
| chr1_961038_G_A | chr1:961038 | 2,464 | 300 | 7,360 | 1.3e-5 |
| chr1_960774_G_T | chr1:960774 | 2,464 | 196 | 6,816 | 6.7e-6 |
| chr1_960705_C_T | chr1:960705 | 2,400 | 302 | 5,824 | 6.6e-6 |
| chr1_959888_C_T | chr1:959888 | 2,400 | 504 | 5,632 | 3.2e-2 |
| chr1_960803_G_T | chr1:960803 | -2,336 | -124 | 8,352 | 6.7e-6 |
| chr1_961146_G_A | chr1:961146 | 2,336 | 380 | 5,568 | 1.3e-5 |
| chr1_966384_T_C | chr1:966384 | 2,304 | -384 | 12,800 | — |
| chr1_966382_G_T | chr1:966382 | -2,304 | -1,360 | 5,376 | — |
| chr1_966232_G_A | chr1:966232 | 2,176 | -32 | 8,192 | 2.6e-5 |
| chr1_966336_C_A | chr1:966336 | -2,176 | -256 | -4,864 | — |
| chr1_966345_C_T | chr1:966345 | -2,112 | -608 | -5,632 | 9.0e-4 |
| chr1_960773_C_T | chr1:960773 | 2,080 | 182 | 6,048 | 6.7e-6 |
| chr1_960907_G_A | chr1:960907 | 2,048 | 320 | 6,144 | 1.3e-5 |
| chr1_959914_G_C | chr1:959914 | 1,984 | 96 | 7,552 | 5.3e-5 |
| chr1_961294_C_T | chr1:961294 | 1,888 | 444 | 5,440 | 1.3e-5 |
| chr1_960899_G_A | chr1:960899 | 1,888 | 284 | 5,184 | 6.6e-6 |
| chr1_966245_G_C | chr1:966245 | -1,856 | -512 | -4,864 | — |
| chr1_966278_T_C | chr1:966278 | 1,792 | 0 | 6,144 | — |
| chr1_960776_C_T | chr1:960776 | 1,792 | 188 | 5,120 | 1.3e-5 |
| chr1_966232_G_C | chr1:966232 | 1,728 | -144 | 8,192 | — |
| chr1_960744_C_T | chr1:960744 | 1,728 | 354 | 7,008 | 1.3e-5 |
| chr1_961225_C_T | chr1:961225 | 1,696 | 536 | 12,800 | 6.6e-6 |
| chr1_961040_G_A | chr1:961040 | 1,696 | 272 | 7,360 | 6.6e-6 |
| chr1_961190_G_T | chr1:961190 | 1,664 | 440 | 10,112 | 1.3e-5 |
| chr1_961172_G_A | chr1:961172 | 1,632 | 496 | 10,560 | 1.3e-5 |
| chr1_961245_G_A | chr1:961245 | 1,632 | 484 | 7,936 | 5.9e-5 |
| chr1_961135_C_T | chr1:961135 | 1,536 | 320 | 8,896 | 2.0e-5 |
| chr1_961182_C_T | chr1:961182 | 1,472 | 396 | 8,704 | 1.3e-5 |
| chr1_960675_C_T | chr1:960675 | 1,472 | 300 | 6,208 | 6.6e-6 |
| chr1_961066_G_A | chr1:961066 | 1,472 | 148 | 5,184 | 3.3e-5 |
| chr1_961026_G_A | chr1:961026 | 1,472 | 346 | 4,960 | 6.6e-6 |
| chr1_960714_C_T | chr1:960714 | 1,440 | 296 | 6,752 | 2.0e-5 |
| chr1_960646_G_T | chr1:960646 | 1,408 | 306 | 5,344 | 2.6e-5 |
| chr1_960905_G_T | chr1:960905 | 1,376 | 344 | 5,856 | 6.6e-6 |
| chr1_961184_C_T | chr1:961184 | 1,344 | 232 | 6,208 | 1.1e-4 |
| chr1_966230_G_T | chr1:966230 | -1,344 | -672 | 5,376 | — |
| chr1_960734_G_T | chr1:960734 | 1,312 | 200 | 5,312 | 2.7e-5 |
| chr1_960803_G_C | chr1:960803 | 1,248 | -88 | 9,440 | 6.7e-6 |
| chr1_960715_C_A | chr1:960715 | -1,184 | 160 | 4,704 | 6.6e-6 |
| chr1_961175_G_A | chr1:961175 | 1,152 | 552 | 11,264 | 1.3e-5 |
| chr1_961181_G_T | chr1:961181 | 1,152 | 480 | 10,752 | 2.6e-5 |
| chr1_960961_C_T | chr1:960961 | 1,152 | 250 | 5,792 | 6.6e-6 |
| chr1_961289_G_A | chr1:961289 | 1,120 | 272 | 7,552 | 6.6e-6 |
| chr1_960970_C_T | chr1:960970 | 1,120 | 244 | 6,880 | 6.6e-6 |
| chr1_961228_C_T | chr1:961228 | 1,088 | 372 | 8,320 | 1.3e-5 |
| chr1_961065_G_T | chr1:961065 | 1,056 | 176 | 5,120 | 6.6e-6 |
| chr1_960793_C_A | chr1:960793 | 1,056 | 264 | 4,832 | 6.7e-6 |
| chr1_960884_G_A | chr1:960884 | -1,056 | 444 | 4,704 | 6.6e-6 |
| chr1_966380_C_A | chr1:966380 | 960 | 0 | 4,864 | — |
| chr1_961337_C_T | chr1:961337 | 896 | 160 | 5,120 | 2.0e-5 |
| chr1_961186_C_T | chr1:961186 | 864 | 308 | 8,064 | 6.6e-6 |
| chr1_961128_C_T | chr1:961128 | 864 | 264 | 5,760 | 6.6e-6 |
| chr1_961256_C_T | chr1:961256 | 864 | 340 | 5,568 | 6.6e-6 |
| chr1_960587_A_G | chr1:960587 | -832 | -304 | -5,792 | 6.6e-6 |
| chr1_966232_G_T | chr1:966232 | 832 | -320 | 5,632 | — |
| chr1_960612_A_G | chr1:960612 | 832 | -238 | -5,184 | 1.3e-5 |
| chr1_961281_C_T | chr1:961281 | 800 | 368 | 6,080 | 6.6e-6 |
| chr1_961208_C_G | chr1:961208 | -768 | -332 | -6,400 | 6.6e-6 |
| chr1_961318_C_T | chr1:961318 | 768 | 272 | 6,016 | 6.6e-6 |
| chr1_961131_C_T | chr1:961131 | 736 | 400 | 8,704 | 2.7e-5 |
| chr1_961011_T_C | chr1:961011 | -736 | -266 | -7,456 | 1.3e-5 |
| chr1_961158_G_A | chr1:961158 | 736 | 228 | 6,272 | 6.6e-6 |
| chr1_961260_C_T | chr1:961260 | -736 | 240 | 4,800 | 2.6e-5 |
| chr1_966384_T_A | chr1:966384 | -704 | -736 | 10,496 | — |
| chr1_961101_A_G | chr1:961101 | -704 | -216 | -5,888 | 1.3e-5 |
| chr1_961198_G_A | chr1:961198 | 672 | 312 | 6,016 | 6.6e-6 |
| chr1_961144_G_A | chr1:961144 | 672 | 396 | 5,120 | 3.3e-5 |
| chr1_960684_C_T | chr1:960684 | 672 | 248 | 5,088 | 6.6e-6 |
| chr1_961200_C_T | chr1:961200 | 640 | 356 | 6,784 | 1.3e-5 |
| chr1_961280_C_T | chr1:961280 | 640 | 436 | 4,736 | 6.6e-6 |
| chr1_961309_A_G | chr1:961309 | -608 | -352 | -9,984 | 6.6e-6 |
| chr1_961173_C_T | chr1:961173 | 608 | 344 | 6,656 | 6.6e-6 |
| chr1_961306_C_A | chr1:961306 | 576 | 488 | 8,512 | 3.3e-5 |
| chr1_961167_C_T | chr1:961167 | 576 | 284 | 6,912 | 1.3e-5 |
| chr1_961168_G_T | chr1:961168 | 576 | 332 | 6,592 | 6.6e-6 |
| chr1_966278_T_G | chr1:966278 | 576 | -96 | 5,376 | — |
| chr1_966383_G_T | chr1:966383 | -576 | -1,248 | 5,376 | — |
| chr1_960990_C_T | chr1:960990 | 576 | 208 | 4,880 | 3.3e-5 |
| chr1_961286_C_A | chr1:961286 | 544 | 184 | 5,952 | 4.6e-5 |
| chr1_961209_C_T | chr1:961209 | 512 | 280 | 7,296 | 6.6e-6 |
| chr1_960883_G_A | chr1:960883 | -512 | 404 | 5,056 | 1.3e-5 |
| chr1_959758_C_T | chr1:959758 | 512 | 112 | 4,864 | 6.6e-6 |
| chr1_961261_G_T | chr1:961261 | 480 | 384 | 6,528 | 6.6e-6 |
| chr1_961112_A_G | chr1:961112 | -480 | -348 | -6,080 | 6.6e-6 |
| chr1_966381_A_G | chr1:966381 | -448 | -720 | 7,168 | — |
| chr1_961134_G_A | chr1:961134 | 448 | 340 | 6,464 | 1.4e-4 |
| chr1_961224_C_T | chr1:961224 | 416 | 524 | 9,344 | 6.6e-6 |
| chr1_961206_C_T | chr1:961206 | 416 | 216 | 6,400 | 6.6e-6 |
| chr1_961057_C_A | chr1:961057 | -384 | 288 | 7,200 | 6.6e-6 |
| chr1_961199_G_T | chr1:961199 | 384 | 324 | 6,400 | 1.3e-5 |
| chr1_961174_T_C | chr1:961174 | -384 | -268 | -6,272 | 6.6e-6 |
| chr1_959902_C_T | chr1:959902 | 384 | 152 | 6,144 | 6.6e-6 |
| chr1_959900_G_A | chr1:959900 | 384 | 128 | 5,760 | 6.6e-6 |
| chr1_961096_A_C | chr1:961096 | -384 | -224 | -5,312 | 6.6e-6 |
| chr1_961188_T_C | chr1:961188 | -352 | -224 | -6,016 | 6.6e-6 |
| chr1_966368_A_G | chr1:966368 | -320 | 64 | 5,888 | — |
| chr1_961063_G_T | chr1:961063 | 320 | 292 | 5,376 | 1.1e-3 |
| chr1_966382_G_C | chr1:966382 | -256 | -832 | 9,984 | — |
| chr1_966381_A_T | chr1:966381 | 256 | -800 | 7,936 | — |
| chr1_966239_A_T | chr1:966239 | -256 | -160 | -5,888 | — |
| chr1_960717_G_A | chr1:960717 | -256 | 286 | 5,632 | 2.0e-5 |
| chr1_961048_G_C | chr1:961048 | 256 | -160 | -5,408 | 1.3e-5 |
| chr1_966384_T_G | chr1:966384 | 256 | -1,536 | 5,120 | — |
| chr1_961095_C_T | chr1:961095 | 256 | 152 | 4,736 | 6.6e-6 |
| chr1_961355_T_G | chr1:961355 | 256 | -184 | -4,736 | 6.6e-6 |
| chr1_960509_A_T | chr1:960509 | 224 | 546 | 5,824 | 3.1e-2 |
| chr1_961152_T_G | chr1:961152 | -224 | -204 | -5,568 | 1.3e-5 |
| chr1_961213_G_A | chr1:961213 | -160 | 176 | 5,120 | 2.0e-5 |
| chr1_961215_C_A | chr1:961215 | -128 | 528 | 9,728 | 6.6e-6 |
| chr1_966383_G_C | chr1:966383 | 128 | -1,072 | 7,168 | 1.3e-5 |
| chr1_966224_T_C | chr1:966224 | 128 | 592 | 5,632 | — |
| chr1_961309_A_T | chr1:961309 | 128 | 48 | -5,248 | 6.6e-6 |
| chr1_960708_C_A | chr1:960708 | -96 | 326 | 6,176 | 6.6e-6 |
| chr1_961129_G_A | chr1:961129 | 96 | 208 | 4,992 | 1.3e-5 |
| chr1_961219_C_T | chr1:961219 | -64 | 312 | 6,144 | 1.3e-5 |
| chr1_961317_C_T | chr1:961317 | 64 | 216 | 5,760 | 2.6e-5 |
| chr1_961138_C_T | chr1:961138 | 64 | 180 | 4,992 | 1.7e-4 |
| chr1_966372_G_T | chr1:966372 | 64 | 224 | 4,864 | — |
| chr1_960902_C_A | chr1:960902 | 48 | 226 | 5,536 | 6.6e-6 |
| chr1_961212_G_A | chr1:961212 | -32 | 240 | 5,888 | 2.0e-5 |
| chr1_961114_C_T | chr1:961114 | 32 | 224 | 4,864 | 4.6e-5 |
| chr1_961278_G_T | chr1:961278 | 0 | 544 | 8,384 | 6.6e-6 |
| chr1_961201_T_C | chr1:961201 | 0 | -228 | -7,040 | 6.6e-6 |
| chr1_960849_G_T | chr1:960849 | 0 | 200 | 5,616 | 2.7e-5 |
| chr1_960583_C_G | chr1:960583 | 0 | -184 | -5,184 | 6.6e-6 |
| chr1_960746_G_A | chr1:960746 | 0 | 212 | 4,832 | 1.3e-5 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.