SCNN1D

Scored variants near SCNN1D

chr1:1,180,435..1,392,029, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_1199569_C_T	chr1:1199569	0.682	1.000	1.000	0.0013%
chr1_1199529_C_A	chr1:1199529	0.415	0.946	1.000	<0.001%
chr1_1199422_G_A	chr1:1199422	0.204	0.540	0.876	<0.001%
chr1_1185465_C_G	chr1:1185465	0.146	0.166	0.843	<0.001%
chr1_1216651_T_G	chr1:1216651	0.226	0.364	0.647	<0.001%
chr1_1199680_C_T	chr1:1199680	-0.098	-0.208	-0.458	<0.001%
chr1_1199464_A_G	chr1:1199464	0.085	0.168	0.451	0.0013%
chr1_1229789_T_C	chr1:1229789	-0.036	-0.035	-0.368	0.0020%
chr1_1180687_G_A	chr1:1180687	0.210	0.347	0.394	0.0013%
chr1_1199525_C_T	chr1:1199525	0.108	0.316	0.386	0.0033%
chr1_1199466_C_G	chr1:1199466	0.078	0.222	0.379	<0.001%
chr1_1185466_C_T	chr1:1185466	0.041	0.062	0.327	<0.001%
chr1_1199401_C_T	chr1:1199401	0.055	0.201	0.314	<0.001%
chr1_1199504_C_A	chr1:1199504	0.115	0.294	0.314	<0.001%
chr1_1216416_G_A	chr1:1216416	0.076	0.150	0.301	<0.001%
chr1_1199706_G_A	chr1:1199706	0.053	0.115	0.294	<0.001%
chr1_1199748_T_A	chr1:1199748	-0.072	-0.157	-0.294	<0.001%
chr1_1229795_T_C	chr1:1229795	-0.005	-0.033	-0.263	—
chr1_1229797_T_C	chr1:1229797	0.053	-0.028	-0.251	0.0046%
chr1_1199579_T_C	chr1:1199579	0.100	0.284	0.268	<0.001%
chr1_1199678_G_A	chr1:1199678	-0.034	-0.089	-0.268	0.100%
chr1_1229758_G_C	chr1:1229758	-0.036	-0.031	-0.228	—
chr1_1199331_G_C	chr1:1199331	-0.005	0.016	0.248	<0.001%
chr1_1199716_C_T	chr1:1199716	-0.045	-0.115	-0.248	0.0039%
chr1_1199723_C_T	chr1:1199723	0.052	0.123	0.242	0.0026%
chr1_1198900_G_C	chr1:1198900	0.035	0.034	0.232	<0.001%
chr1_1185224_A_C	chr1:1185224	0.019	0.011	0.229	<0.001%
chr1_1185333_G_A	chr1:1185333	0.060	0.061	0.229	<0.001%
chr1_1199570_G_A	chr1:1199570	0.084	0.233	0.229	0.0013%
chr1_1229753_T_C	chr1:1229753	-0.028	-0.038	-0.205	—
chr1_1185161_T_G	chr1:1185161	-0.012	-0.013	-0.222	0.0020%
chr1_1215919_C_G	chr1:1215919	0.045	0.088	0.222	<0.001%
chr1_1185110_G_T	chr1:1185110	0.046	-0.072	-0.216	0.0013%
chr1_1229740_A_G	chr1:1229740	0.043	0.072	0.193	—
chr1_1199526_C_T	chr1:1199526	0.070	0.228	0.209	<0.001%
chr1_1199572_G_A	chr1:1199572	0.064	0.184	0.209	0.0020%
chr1_1199799_C_A	chr1:1199799	-0.011	0.000	-0.209	<0.001%
chr1_1199669_C_T	chr1:1199669	-0.053	-0.131	-0.203	0.0013%
chr1_1229785_A_G	chr1:1229785	-0.043	0.001	0.181	—
chr1_1185197_C_T	chr1:1185197	0.012	-0.002	-0.196	<0.001%
chr1_1216640_C_G	chr1:1216640	-0.015	-0.010	0.196	<0.001%
chr1_1229791_C_G	chr1:1229791	0.015	0.006	0.170	—
chr1_1199331_G_T	chr1:1199331	0.006	0.026	0.183	<0.001%
chr1_1199495_A_G	chr1:1199495	0.037	0.072	0.183	<0.001%
chr1_1199606_G_A	chr1:1199606	-0.033	-0.096	-0.183	<0.001%
chr1_1199718_T_G	chr1:1199718	-0.023	-0.118	-0.183	<0.001%
chr1_1180685_G_A	chr1:1180685	0.082	0.133	0.181	0.0072%
chr1_1185194_G_A	chr1:1185194	-0.022	-0.035	-0.176	<0.001%
chr1_1229790_C_A	chr1:1229790	0.025	0.020	0.158	—
chr1_1229798_C_G	chr1:1229798	0.000	0.014	0.158	—
chr1_1229799_C_G	chr1:1229799	0.012	0.009	0.158	—
chr1_1199407_T_G	chr1:1199407	0.057	0.093	0.170	<0.001%
chr1_1199643_T_G	chr1:1199643	-0.049	-0.075	-0.170	0.0020%
chr1_1199799_C_T	chr1:1199799	-0.016	-0.005	-0.170	0.0013%
chr1_1216425_A_C	chr1:1216425	0.021	0.000	0.170	0.0092%
chr1_1229759_G_C	chr1:1229759	-0.026	-0.018	-0.152	—
chr1_1229791_C_A	chr1:1229791	0.028	0.019	0.152	<0.001%
chr1_1229793_C_G	chr1:1229793	0.020	0.011	0.152	—
chr1_1199617_C_T	chr1:1199617	0.106	0.035	0.092	0.017%
chr1_1198975_C_T	chr1:1198975	0.016	0.039	0.167	0.0026%
chr1_1198984_C_T	chr1:1198984	0.015	0.038	0.167	<0.001%
chr1_1180642_C_T	chr1:1180642	0.001	-0.044	-0.164	0.0026%
chr1_1198929_G_C	chr1:1198929	0.008	-0.014	-0.163	0.018%
chr1_1199675_G_A	chr1:1199675	-0.034	-0.062	-0.163	0.0033%
chr1_1199727_C_T	chr1:1199727	0.042	0.058	0.163	10.3%
chr1_1216597_T_C	chr1:1216597	-0.024	-0.064	-0.163	0.0033%
chr1_1229790_C_G	chr1:1229790	0.017	0.016	0.146	—
chr1_1185156_G_A	chr1:1185156	0.021	0.045	0.157	2.64%
chr1_1199534_G_C	chr1:1199534	-0.036	-0.101	-0.157	0.0020%
chr1_1199575_A_G	chr1:1199575	0.053	0.136	0.157	<0.001%
chr1_1215919_C_T	chr1:1215919	0.041	0.062	0.157	<0.001%
chr1_1216640_C_T	chr1:1216640	0.010	0.027	0.157	<0.001%
chr1_1229769_C_A	chr1:1229769	0.079	-0.037	0.041	—
chr1_1229790_C_T	chr1:1229790	0.012	0.016	0.140	—
chr1_1229796_C_G	chr1:1229796	0.007	0.016	0.140	—
chr1_1180532_C_T	chr1:1180532	0.025	0.013	0.150	0.0020%
chr1_1185213_G_A	chr1:1185213	0.025	0.027	0.150	<0.001%
chr1_1185360_G_T	chr1:1185360	-0.006	0.011	-0.150	<0.001%
chr1_1216609_C_G	chr1:1216609	0.002	0.002	0.150	<0.001%
chr1_1229799_C_A	chr1:1229799	0.026	0.018	0.135	—
chr1_1229800_C_G	chr1:1229800	0.008	0.014	0.135	—
chr1_1185375_C_A	chr1:1185375	-0.002	-0.021	-0.144	0.016%
chr1_1185494_C_T	chr1:1185494	-0.014	-0.005	-0.144	<0.001%
chr1_1199368_A_G	chr1:1199368	0.031	0.054	0.144	<0.001%
chr1_1199560_G_A	chr1:1199560	-0.030	-0.043	-0.144	<0.001%
chr1_1229792_C_A	chr1:1229792	0.023	0.044	0.129	—
chr1_1199467_A_G	chr1:1199467	0.002	0.014	0.137	<0.001%
chr1_1199615_A_C	chr1:1199615	0.028	0.067	0.137	<0.001%
chr1_1229756_C_G	chr1:1229756	-0.008	0.004	0.123	—
chr1_1229788_C_G	chr1:1229788	0.000	0.005	0.123	—
chr1_1229791_C_T	chr1:1229791	0.020	0.015	0.123	<0.001%
chr1_1229794_C_G	chr1:1229794	0.010	0.006	0.123	—
chr1_1229800_C_A	chr1:1229800	0.026	0.020	0.123	—
chr1_1199534_G_A	chr1:1199534	-0.027	-0.075	-0.131	0.0013%
chr1_1199724_G_A	chr1:1199724	0.041	0.117	0.131	0.011%
chr1_1216218_C_T	chr1:1216218	-0.001	-0.016	-0.131	0.0020%
chr1_1216545_C_T	chr1:1216545	0.016	0.014	0.131	<0.001%
chr1_1216594_G_A	chr1:1216594	0.003	0.002	-0.131	0.0099%
chr1_1216639_C_G	chr1:1216639	-0.002	0.011	0.131	<0.001%
chr1_1229750_G_C	chr1:1229750	-0.010	-0.016	-0.117	—
chr1_1229776_A_C	chr1:1229776	0.015	0.014	0.117	—
chr1_1229778_A_C	chr1:1229778	0.026	0.015	0.117	—
chr1_1180519_C_T	chr1:1180519	0.081	0.091	0.072	<0.001%
chr1_1185334_G_T	chr1:1185334	0.037	0.051	0.124	0.0020%
chr1_1185337_T_A	chr1:1185337	0.028	0.050	0.124	<0.001%
chr1_1185509_G_T	chr1:1185509	0.009	-0.011	-0.124	0.024%
chr1_1199380_G_A	chr1:1199380	0.035	0.078	0.124	0.0033%
chr1_1199508_T_C	chr1:1199508	-0.021	-0.073	-0.124	<0.001%
chr1_1199782_G_A	chr1:1199782	0.004	0.003	-0.124	<0.001%
chr1_1216548_A_G	chr1:1216548	-0.007	-0.013	0.124	<0.001%
chr1_1229793_C_A	chr1:1229793	0.023	0.014	0.111	—
chr1_1229793_C_T	chr1:1229793	0.017	0.015	0.111	—
chr1_1229797_T_G	chr1:1229797	-0.010	-0.008	0.111	—
chr1_1180722_G_T	chr1:1180722	-0.049	-0.075	-0.121	<0.001%
chr1_1185408_T_C	chr1:1185408	0.010	0.034	0.118	<0.001%
chr1_1198924_C_G	chr1:1198924	0.003	-0.002	-0.118	0.030%
chr1_1199450_C_A	chr1:1199450	-0.004	-0.021	-0.118	0.0026%
chr1_1199547_C_A	chr1:1199547	0.049	0.112	0.118	<0.001%
chr1_1199571_C_T	chr1:1199571	0.046	0.117	0.118	0.0033%
chr1_1199788_G_C	chr1:1199788	-0.019	-0.021	-0.118	<0.001%
chr1_1229754_C_A	chr1:1229754	0.018	0.020	0.105	—
chr1_1229757_C_A	chr1:1229757	0.017	0.026	0.105	—
chr1_1199638_G_A	chr1:1199638	0.073	0.080	0.105	<0.001%
chr1_1185632_G_A	chr1:1185632	0.021	0.029	0.111	0.015%
chr1_1199071_A_G	chr1:1199071	-0.018	-0.020	-0.111	<0.001%
chr1_1199327_G_A	chr1:1199327	0.004	0.022	0.111	13.8%
chr1_1216593_G_C	chr1:1216593	-0.006	-0.006	-0.111	16.5%
chr1_1229756_C_A	chr1:1229756	0.017	0.016	0.099	—
chr1_1229762_T_C	chr1:1229762	-0.012	-0.021	-0.099	—
chr1_1229794_C_A	chr1:1229794	0.013	0.013	0.099	—
chr1_1229794_C_T	chr1:1229794	0.003	0.010	0.099	<0.001%
chr1_1199007_G_A	chr1:1199007	0.000	0.016	0.108	0.0033%
chr1_1185109_G_A	chr1:1185109	0.036	-0.032	-0.105	0.016%
chr1_1185160_G_T	chr1:1185160	0.023	0.050	0.105	0.0013%
chr1_1185338_G_T	chr1:1185338	-0.010	-0.010	-0.105	0.015%
chr1_1185674_T_A	chr1:1185674	-0.005	0.048	0.105	<0.001%
chr1_1199028_C_T	chr1:1199028	-0.002	-0.013	-0.105	0.0020%
chr1_1199408_G_A	chr1:1199408	0.021	0.064	0.105	0.0013%
chr1_1199523_C_T	chr1:1199523	0.008	0.083	0.105	<0.001%
chr1_1199584_G_T	chr1:1199584	-0.021	-0.054	-0.105	0.0039%
chr1_1215852_T_C	chr1:1215852	-0.018	-0.026	-0.105	17.9%
chr1_1216610_C_G	chr1:1216610	-0.004	0.000	0.105	<0.001%
chr1_1229722_A_C	chr1:1229722	0.011	0.018	0.094	—
chr1_1229724_A_C	chr1:1229724	0.020	0.005	0.094	—
chr1_1229782_A_G	chr1:1229782	-0.010	0.000	0.094	<0.001%
chr1_1229792_C_G	chr1:1229792	0.020	0.050	0.094	—
chr1_1229798_C_A	chr1:1229798	0.015	0.016	0.094	—
chr1_1229800_C_T	chr1:1229800	0.017	0.009	0.094	—
chr1_1185238_G_C	chr1:1185238	0.027	0.053	0.098	0.0033%
chr1_1185346_G_A	chr1:1185346	-0.004	-0.003	-0.098	0.0079%
chr1_1185604_G_A	chr1:1185604	-0.005	0.003	-0.098	<0.001%
chr1_1185707_G_A	chr1:1185707	0.014	0.011	-0.098	0.0059%
chr1_1198938_G_A	chr1:1198938	0.006	0.010	-0.098	<0.001%
chr1_1199273_C_T	chr1:1199273	-0.008	-0.010	-0.098	0.022%
chr1_1199283_G_A	chr1:1199283	-0.005	-0.005	-0.098	0.0013%
chr1_1199409_C_T	chr1:1199409	-0.025	-0.070	-0.098	0.0026%
chr1_1199544_C_T	chr1:1199544	-0.016	-0.029	-0.098	0.0066%
chr1_1199814_C_A	chr1:1199814	0.005	0.019	0.098	0.0046%
chr1_1216647_C_T	chr1:1216647	0.028	0.038	0.098	0.0013%
chr1_1229714_C_A	chr1:1229714	-0.015	-0.014	-0.088	—
chr1_1229720_T_A	chr1:1229720	0.036	-0.015	0.088	—
chr1_1229722_A_T	chr1:1229722	0.019	0.060	0.088	—
chr1_1229726_C_A	chr1:1229726	-0.002	-0.019	-0.088	—
chr1_1229756_C_T	chr1:1229756	0.000	0.013	0.088	—
chr1_1229757_C_T	chr1:1229757	0.012	0.025	0.088	0.0033%
chr1_1229777_G_C	chr1:1229777	0.043	0.040	0.088	—
chr1_1229779_A_C	chr1:1229779	0.026	0.015	0.088	—
chr1_1229779_A_G	chr1:1229779	0.020	0.018	0.088	—
chr1_1229792_C_T	chr1:1229792	0.018	0.040	0.088	—
chr1_1229799_C_T	chr1:1229799	0.010	0.006	0.088	<0.001%
chr1_1180596_G_A	chr1:1180596	0.032	-0.007	0.095	<0.001%
chr1_1185340_C_T	chr1:1185340	0.012	0.027	0.092	<0.001%
chr1_1185343_C_T	chr1:1185343	-0.004	0.013	-0.092	<0.001%
chr1_1185518_C_T	chr1:1185518	0.051	0.046	0.092	0.0020%
chr1_1185656_G_A	chr1:1185656	0.033	-0.002	0.092	0.012%
chr1_1185706_C_T	chr1:1185706	0.058	0.054	-0.026	0.0039%
chr1_1198926_C_T	chr1:1198926	0.003	0.000	-0.092	0.0020%
chr1_1199326_G_A	chr1:1199326	0.005	0.014	0.092	0.0020%
chr1_1199330_G_A	chr1:1199330	0.002	0.018	0.092	0.013%
chr1_1199343_G_A	chr1:1199343	-0.005	0.006	0.092	0.0020%
chr1_1199618_G_C	chr1:1199618	-0.008	-0.010	-0.092	<0.001%
chr1_1199642_G_A	chr1:1199642	-0.007	-0.022	-0.092	0.0020%
chr1_1199752_C_T	chr1:1199752	0.012	0.048	0.092	0.0046%
chr1_1215892_G_A	chr1:1215892	0.008	0.008	-0.092	<0.001%
chr1_1216073_G_A	chr1:1216073	0.004	-0.005	-0.092	<0.001%
chr1_1216513_G_A	chr1:1216513	-0.007	-0.011	-0.092	<0.001%
chr1_1216554_C_T	chr1:1216554	0.010	0.029	0.092	<0.001%
chr1_1216579_C_T	chr1:1216579	0.005	0.006	0.092	<0.001%
chr1_1229719_T_A	chr1:1229719	0.027	0.025	0.082	—
chr1_1229742_G_A	chr1:1229742	-0.003	-0.003	-0.082	—
chr1_1229755_C_G	chr1:1229755	0.003	0.014	0.082	—
chr1_1229796_C_A	chr1:1229796	0.007	0.013	0.082	—
chr1_1180601_G_T	chr1:1180601	0.057	0.064	0.039	<0.001%
chr1_1180644_T_G	chr1:1180644	0.021	-0.002	-0.088	0.0013%
chr1_1199030_G_C	chr1:1199030	-0.003	-0.014	-0.088	0.0066%
chr1_1185072_G_A	chr1:1185072	0.006	0.027	0.085	0.0026%
chr1_1185354_C_G	chr1:1185354	-0.015	0.010	-0.085	<0.001%
chr1_1185728_T_G	chr1:1185728	0.002	-0.064	0.085	<0.001%
chr1_1198985_G_C	chr1:1198985	-0.028	0.003	-0.085	0.0072%
chr1_1199455_A_G	chr1:1199455	0.025	0.051	0.085	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.