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SCNN1D
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SCNN1D
chr1:1,180,435..1,392,029, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_1199569_C_T | chr1:1199569 | 21,184 | 14,496 | 33,024 | 1.3e-5 |
| chr1_1199529_C_A | chr1:1199529 | 12,896 | 9,472 | 23,040 | 6.6e-6 |
| chr1_1216651_T_G | chr1:1216651 | 7,008 | 3,648 | 12,672 | 6.6e-6 |
| chr1_1180687_G_A | chr1:1180687 | 6,512 | 3,478 | 7,712 | 1.3e-5 |
| chr1_1199422_G_A | chr1:1199422 | 6,336 | 5,408 | 17,152 | 6.6e-6 |
| chr1_1185465_C_G | chr1:1185465 | 4,544 | 1,664 | 16,512 | 6.6e-6 |
| chr1_1199504_C_A | chr1:1199504 | 3,584 | 2,944 | 6,144 | 6.6e-6 |
| chr1_1199525_C_T | chr1:1199525 | 3,360 | 3,168 | 7,552 | 3.3e-5 |
| chr1_1199617_C_T | chr1:1199617 | 3,296 | 352 | 1,792 | 1.7e-4 |
| chr1_1199579_T_C | chr1:1199579 | 3,104 | 2,848 | 5,248 | 6.6e-6 |
| chr1_1229769_C_A | chr1:1229769 | 3,072 | -464 | 896 | — |
| chr1_1199680_C_T | chr1:1199680 | -3,040 | -2,080 | -8,960 | 6.6e-6 |
| chr1_1199464_A_G | chr1:1199464 | 2,624 | 1,680 | 8,832 | 1.3e-5 |
| chr1_1199570_G_A | chr1:1199570 | 2,592 | 2,336 | 4,480 | 1.3e-5 |
| chr1_1180685_G_A | chr1:1180685 | 2,552 | 1,336 | 3,552 | 7.2e-5 |
| chr1_1180519_C_T | chr1:1180519 | 2,512 | 912 | 1,408 | 6.6e-6 |
| chr1_1199466_C_G | chr1:1199466 | 2,432 | 2,224 | 7,424 | 6.6e-6 |
| chr1_1216416_G_A | chr1:1216416 | 2,368 | 1,504 | 5,888 | 6.6e-6 |
| chr1_1199638_G_A | chr1:1199638 | 2,272 | 800 | 2,048 | 6.6e-6 |
| chr1_1199748_T_A | chr1:1199748 | -2,240 | -1,568 | -5,760 | 6.6e-6 |
| chr1_1199526_C_T | chr1:1199526 | 2,176 | 2,288 | 4,096 | 6.6e-6 |
| chr1_1229797_T_C | chr1:1229797 | 2,048 | -352 | -5,504 | 4.6e-5 |
| chr1_1199572_G_A | chr1:1199572 | 1,984 | 1,840 | 4,096 | 2.0e-5 |
| chr1_1185333_G_A | chr1:1185333 | 1,856 | 608 | 4,480 | 6.6e-6 |
| chr1_1185706_C_T | chr1:1185706 | 1,792 | 544 | -512 | 3.9e-5 |
| chr1_1180601_G_T | chr1:1180601 | 1,768 | 640 | 768 | 6.6e-6 |
| chr1_1199407_T_G | chr1:1199407 | 1,760 | 928 | 3,328 | 6.6e-6 |
| chr1_1199401_C_T | chr1:1199401 | 1,696 | 2,016 | 6,144 | 6.6e-6 |
| chr1_1229740_A_G | chr1:1229740 | 1,664 | 912 | 4,224 | — |
| chr1_1229785_A_G | chr1:1229785 | -1,664 | 16 | 3,968 | — |
| chr1_1229777_G_C | chr1:1229777 | 1,664 | 512 | 1,920 | — |
| chr1_1199706_G_A | chr1:1199706 | 1,632 | 1,152 | 5,760 | 6.6e-6 |
| chr1_1199669_C_T | chr1:1199669 | -1,632 | -1,312 | -3,968 | 1.3e-5 |
| chr1_1199575_A_G | chr1:1199575 | 1,632 | 1,360 | 3,072 | 6.6e-6 |
| chr1_1199723_C_T | chr1:1199723 | 1,600 | 1,232 | 4,736 | 2.6e-5 |
| chr1_1185518_C_T | chr1:1185518 | 1,568 | 464 | 1,792 | 2.0e-5 |
| chr1_1199643_T_G | chr1:1199643 | -1,536 | -752 | -3,328 | 2.0e-5 |
| chr1_1199547_C_A | chr1:1199547 | 1,536 | 1,120 | 2,304 | 6.6e-6 |
| chr1_1180722_G_T | chr1:1180722 | -1,520 | -752 | -2,368 | 6.6e-6 |
| chr1_1185110_G_T | chr1:1185110 | 1,440 | -720 | -4,224 | 1.3e-5 |
| chr1_1199571_C_T | chr1:1199571 | 1,440 | 1,168 | 2,304 | 3.3e-5 |
| chr1_1229789_T_C | chr1:1229789 | -1,408 | -448 | -8,064 | 2.0e-5 |
| chr1_1229758_G_C | chr1:1229758 | -1,408 | -400 | -4,992 | — |
| chr1_1199716_C_T | chr1:1199716 | -1,408 | -1,152 | -4,864 | 3.9e-5 |
| chr1_1215919_C_G | chr1:1215919 | 1,408 | 880 | 4,352 | 6.6e-6 |
| chr1_1229720_T_A | chr1:1229720 | 1,408 | -192 | 1,920 | — |
| chr1_1199727_C_T | chr1:1199727 | 1,312 | 576 | 3,200 | 1.0e-1 |
| chr1_1185466_C_T | chr1:1185466 | 1,280 | 624 | 6,400 | 6.6e-6 |
| chr1_1215919_C_T | chr1:1215919 | 1,280 | 624 | 3,072 | 6.6e-6 |
| chr1_1199724_G_A | chr1:1199724 | 1,280 | 1,168 | 2,560 | 1.1e-4 |
| chr1_1199495_A_G | chr1:1199495 | 1,152 | 720 | 3,584 | 6.6e-6 |
| chr1_1185334_G_T | chr1:1185334 | 1,152 | 512 | 2,432 | 2.0e-5 |
| chr1_1199534_G_C | chr1:1199534 | -1,120 | -1,008 | -3,072 | 2.0e-5 |
| chr1_1185109_G_A | chr1:1185109 | 1,120 | -320 | -2,048 | 1.6e-4 |
| chr1_1229753_T_C | chr1:1229753 | -1,088 | -480 | -4,480 | — |
| chr1_1229791_C_A | chr1:1229791 | 1,088 | 240 | 3,328 | 6.6e-6 |
| chr1_1199380_G_A | chr1:1199380 | 1,088 | 784 | 2,432 | 3.3e-5 |
| chr1_1198900_G_C | chr1:1198900 | 1,072 | 344 | 4,544 | 6.6e-6 |
| chr1_1199678_G_A | chr1:1199678 | -1,056 | -896 | -5,248 | 1.0e-3 |
| chr1_1199675_G_A | chr1:1199675 | -1,056 | -624 | -3,200 | 3.3e-5 |
| chr1_1229719_T_A | chr1:1229719 | 1,056 | 320 | 1,792 | — |
| chr1_1199606_G_A | chr1:1199606 | -1,024 | -960 | -3,584 | 6.6e-6 |
| chr1_1229759_G_C | chr1:1229759 | -1,024 | -224 | -3,328 | — |
| chr1_1229799_C_A | chr1:1229799 | 1,024 | 224 | 2,944 | — |
| chr1_1229800_C_A | chr1:1229800 | 1,024 | 256 | 2,688 | — |
| chr1_1229778_A_C | chr1:1229778 | 1,024 | 192 | 2,560 | — |
| chr1_1229779_A_C | chr1:1229779 | 1,024 | 192 | 1,920 | — |
| chr1_1185656_G_A | chr1:1185656 | 1,024 | -16 | 1,792 | 1.2e-4 |
| chr1_1180596_G_A | chr1:1180596 | 984 | -74 | 1,856 | 6.6e-6 |
| chr1_1229790_C_A | chr1:1229790 | 960 | 256 | 3,456 | — |
| chr1_1199368_A_G | chr1:1199368 | 960 | 544 | 2,816 | 6.6e-6 |
| chr1_1199560_G_A | chr1:1199560 | -928 | -432 | -2,816 | 6.6e-6 |
| chr1_1229792_C_A | chr1:1229792 | 896 | 560 | 2,816 | — |
| chr1_1229793_C_A | chr1:1229793 | 896 | 176 | 2,432 | — |
| chr1_1199615_A_C | chr1:1199615 | 864 | 672 | 2,688 | 6.6e-6 |
| chr1_1185337_T_A | chr1:1185337 | 864 | 496 | 2,432 | 6.6e-6 |
| chr1_1216647_C_T | chr1:1216647 | 864 | 384 | 1,920 | 1.3e-5 |
| chr1_1198985_G_C | chr1:1198985 | -864 | 32 | -1,664 | 7.2e-5 |
| chr1_1199534_G_A | chr1:1199534 | -832 | -752 | -2,560 | 1.3e-5 |
| chr1_1185238_G_C | chr1:1185238 | 832 | 528 | 1,920 | 3.3e-5 |
| chr1_1229793_C_G | chr1:1229793 | 768 | 144 | 3,328 | — |
| chr1_1180532_C_T | chr1:1180532 | 768 | 128 | 2,944 | 2.0e-5 |
| chr1_1185213_G_A | chr1:1185213 | 768 | 272 | 2,944 | 6.6e-6 |
| chr1_1229791_C_T | chr1:1229791 | 768 | 192 | 2,688 | 6.6e-6 |
| chr1_1229724_A_C | chr1:1229724 | 768 | 64 | 2,048 | — |
| chr1_1229792_C_G | chr1:1229792 | 768 | 640 | 2,048 | — |
| chr1_1199409_C_T | chr1:1199409 | -768 | -704 | -1,920 | 2.6e-5 |
| chr1_1229779_A_G | chr1:1229779 | 768 | 224 | 1,920 | — |
| chr1_1199455_A_G | chr1:1199455 | 768 | 512 | 1,664 | 6.6e-6 |
| chr1_1216597_T_C | chr1:1216597 | -736 | -640 | -3,200 | 3.3e-5 |
| chr1_1229722_A_T | chr1:1229722 | 736 | 768 | 1,920 | — |
| chr1_1199718_T_G | chr1:1199718 | -704 | -1,184 | -3,584 | 6.6e-6 |
| chr1_1229754_C_A | chr1:1229754 | 704 | 256 | 2,304 | — |
| chr1_1185160_G_T | chr1:1185160 | 704 | 496 | 2,048 | 1.3e-5 |
| chr1_1229792_C_T | chr1:1229792 | 704 | 512 | 1,920 | — |
| chr1_1185194_G_A | chr1:1185194 | -672 | -352 | -3,456 | 6.6e-6 |
| chr1_1180644_T_G | chr1:1180644 | 656 | -16 | -1,728 | 1.3e-5 |
| chr1_1216425_A_C | chr1:1216425 | 640 | 0 | 3,328 | 9.2e-5 |
| chr1_1229790_C_G | chr1:1229790 | 640 | 208 | 3,200 | — |
| chr1_1185156_G_A | chr1:1185156 | 640 | 448 | 3,072 | 2.6e-2 |
| chr1_1199508_T_C | chr1:1199508 | -640 | -736 | -2,432 | 6.6e-6 |
| chr1_1229793_C_T | chr1:1229793 | 640 | 192 | 2,432 | — |
| chr1_1229757_C_A | chr1:1229757 | 640 | 336 | 2,304 | — |
| chr1_1185632_G_A | chr1:1185632 | 640 | 288 | 2,176 | 1.5e-4 |
| chr1_1229756_C_A | chr1:1229756 | 640 | 208 | 2,176 | — |
| chr1_1199408_G_A | chr1:1199408 | 640 | 640 | 2,048 | 1.3e-5 |
| chr1_1199584_G_T | chr1:1199584 | -640 | -544 | -2,048 | 3.9e-5 |
| chr1_1229800_C_T | chr1:1229800 | 640 | 112 | 2,048 | — |
| chr1_1185224_A_C | chr1:1185224 | 576 | 112 | 4,480 | 6.6e-6 |
| chr1_1229791_C_G | chr1:1229791 | 576 | 80 | 3,712 | — |
| chr1_1229776_A_C | chr1:1229776 | 576 | 176 | 2,560 | — |
| chr1_1199788_G_C | chr1:1199788 | -576 | -208 | -2,304 | 6.6e-6 |
| chr1_1229798_C_A | chr1:1229798 | 576 | 208 | 2,048 | — |
| chr1_1229714_C_A | chr1:1229714 | -576 | -176 | -1,920 | — |
| chr1_1199071_A_G | chr1:1199071 | -544 | -200 | -2,176 | 6.6e-6 |
| chr1_1215852_T_C | chr1:1215852 | -544 | -256 | -2,048 | 1.8e-1 |
| chr1_1199799_C_T | chr1:1199799 | -512 | -48 | -3,328 | 1.3e-5 |
| chr1_1216545_C_T | chr1:1216545 | 512 | 144 | 2,560 | 6.6e-6 |
| chr1_1229794_C_A | chr1:1229794 | 512 | 160 | 2,176 | — |
| chr1_1199544_C_T | chr1:1199544 | -512 | -288 | -1,920 | 6.6e-5 |
| chr1_1198975_C_T | chr1:1198975 | 496 | 392 | 3,264 | 2.6e-5 |
| chr1_1216640_C_G | chr1:1216640 | -480 | -96 | 3,840 | 6.6e-6 |
| chr1_1198984_C_T | chr1:1198984 | 480 | 384 | 3,264 | 6.6e-6 |
| chr1_1185354_C_G | chr1:1185354 | -480 | 96 | -1,664 | 6.6e-6 |
| chr1_1229799_C_G | chr1:1229799 | 448 | 112 | 3,456 | — |
| chr1_1229790_C_T | chr1:1229790 | 448 | 208 | 3,072 | — |
| chr1_1185494_C_T | chr1:1185494 | -448 | -48 | -2,816 | 6.6e-6 |
| chr1_1229762_T_C | chr1:1229762 | -448 | -272 | -2,176 | — |
| chr1_1229757_C_T | chr1:1229757 | 448 | 320 | 1,920 | 3.3e-5 |
| chr1_1185707_G_A | chr1:1185707 | 432 | 112 | -1,920 | 5.9e-5 |
| chr1_1229722_A_C | chr1:1229722 | 416 | 224 | 2,048 | — |
| chr1_1185161_T_G | chr1:1185161 | -384 | -128 | -4,352 | 2.0e-5 |
| chr1_1185197_C_T | chr1:1185197 | 384 | -16 | -3,840 | 6.6e-6 |
| chr1_1229794_C_G | chr1:1229794 | 384 | 80 | 2,688 | — |
| chr1_1229750_G_C | chr1:1229750 | -384 | -208 | -2,560 | — |
| chr1_1229797_T_G | chr1:1229797 | -384 | -96 | 2,432 | — |
| chr1_1229782_A_G | chr1:1229782 | -384 | 0 | 2,048 | 6.6e-6 |
| chr1_1229799_C_T | chr1:1229799 | 384 | 80 | 1,920 | 6.6e-6 |
| chr1_1185340_C_T | chr1:1185340 | 384 | 272 | 1,792 | 6.6e-6 |
| chr1_1199752_C_T | chr1:1199752 | 384 | 480 | 1,792 | 4.6e-5 |
| chr1_1199799_C_A | chr1:1199799 | -352 | 0 | -4,096 | 6.6e-6 |
| chr1_1216640_C_T | chr1:1216640 | 320 | 272 | 3,072 | 6.6e-6 |
| chr1_1229800_C_G | chr1:1229800 | 320 | 176 | 2,944 | — |
| chr1_1229756_C_G | chr1:1229756 | -320 | 48 | 2,688 | — |
| chr1_1185408_T_C | chr1:1185408 | 320 | 336 | 2,304 | 6.6e-6 |
| chr1_1185338_G_T | chr1:1185338 | -320 | -96 | -2,048 | 1.5e-4 |
| chr1_1216554_C_T | chr1:1216554 | 320 | 288 | 1,792 | 6.6e-6 |
| chr1_1185509_G_T | chr1:1185509 | 288 | -112 | -2,432 | 2.4e-4 |
| chr1_1198929_G_C | chr1:1198929 | 256 | -136 | -3,200 | 1.8e-4 |
| chr1_1229796_C_G | chr1:1229796 | 256 | 208 | 3,072 | — |
| chr1_1199523_C_T | chr1:1199523 | 256 | 832 | 2,048 | 6.6e-6 |
| chr1_1199273_C_T | chr1:1199273 | -256 | -96 | -1,920 | 2.2e-4 |
| chr1_1199618_G_C | chr1:1199618 | -256 | -96 | -1,792 | 6.6e-6 |
| chr1_1215892_G_A | chr1:1215892 | 256 | 80 | -1,792 | 6.6e-6 |
| chr1_1229796_C_A | chr1:1229796 | 256 | 160 | 1,792 | — |
| chr1_1216548_A_G | chr1:1216548 | -224 | -128 | 2,432 | 6.6e-6 |
| chr1_1199642_G_A | chr1:1199642 | -224 | -224 | -1,792 | 2.0e-5 |
| chr1_1216513_G_A | chr1:1216513 | -224 | -112 | -1,792 | 6.6e-6 |
| chr1_1229795_T_C | chr1:1229795 | -192 | -416 | -5,760 | — |
| chr1_1199331_G_T | chr1:1199331 | 192 | 256 | 3,584 | 6.6e-6 |
| chr1_1185360_G_T | chr1:1185360 | -192 | 112 | -2,944 | 6.6e-6 |
| chr1_1216593_G_C | chr1:1216593 | -192 | -64 | -2,176 | 1.6e-1 |
| chr1_1185072_G_A | chr1:1185072 | 192 | 272 | 1,664 | 2.6e-5 |
| chr1_1198938_G_A | chr1:1198938 | 176 | 96 | -1,920 | 6.6e-6 |
| chr1_1199331_G_C | chr1:1199331 | -160 | 160 | 4,864 | 6.6e-6 |
| chr1_1185674_T_A | chr1:1185674 | -160 | 480 | 2,048 | 6.6e-6 |
| chr1_1185604_G_A | chr1:1185604 | -160 | 32 | -1,920 | 6.6e-6 |
| chr1_1199283_G_A | chr1:1199283 | -160 | -48 | -1,920 | 1.3e-5 |
| chr1_1199814_C_A | chr1:1199814 | 160 | 192 | 1,920 | 4.6e-5 |
| chr1_1199326_G_A | chr1:1199326 | 160 | 144 | 1,792 | 2.0e-5 |
| chr1_1199343_G_A | chr1:1199343 | -160 | 64 | 1,792 | 2.0e-5 |
| chr1_1216579_C_T | chr1:1216579 | 160 | 64 | 1,792 | 6.6e-6 |
| chr1_1199782_G_A | chr1:1199782 | 128 | 32 | -2,432 | 6.6e-6 |
| chr1_1199450_C_A | chr1:1199450 | -128 | -208 | -2,304 | 2.6e-5 |
| chr1_1199327_G_A | chr1:1199327 | 128 | 224 | 2,176 | 1.4e-1 |
| chr1_1229794_C_T | chr1:1229794 | 128 | 128 | 2,176 | 6.6e-6 |
| chr1_1216610_C_G | chr1:1216610 | -128 | 0 | 2,048 | 6.6e-6 |
| chr1_1185346_G_A | chr1:1185346 | -128 | -32 | -1,920 | 7.9e-5 |
| chr1_1185343_C_T | chr1:1185343 | -128 | 128 | -1,792 | 6.6e-6 |
| chr1_1216073_G_A | chr1:1216073 | 128 | -48 | -1,792 | 6.6e-6 |
| chr1_1229742_G_A | chr1:1229742 | -128 | -32 | -1,792 | — |
| chr1_1229755_C_G | chr1:1229755 | 128 | 176 | 1,792 | — |
| chr1_1216594_G_A | chr1:1216594 | 96 | 16 | -2,560 | 9.9e-5 |
| chr1_1198924_C_G | chr1:1198924 | 96 | -16 | -2,304 | 3.0e-4 |
| chr1_1199030_G_C | chr1:1199030 | -96 | -144 | -1,728 | 6.6e-5 |
| chr1_1198926_C_T | chr1:1198926 | 80 | 0 | -1,792 | 2.0e-5 |
| chr1_1216609_C_G | chr1:1216609 | 64 | 16 | 2,944 | 6.6e-6 |
| chr1_1185375_C_A | chr1:1185375 | -64 | -208 | -2,816 | 1.6e-4 |
| chr1_1199467_A_G | chr1:1199467 | 64 | 144 | 2,688 | 6.6e-6 |
| chr1_1216639_C_G | chr1:1216639 | -64 | 112 | 2,560 | 6.6e-6 |
| chr1_1229726_C_A | chr1:1229726 | -64 | -240 | -1,920 | — |
| chr1_1199330_G_A | chr1:1199330 | 64 | 176 | 1,792 | 1.3e-4 |
| chr1_1199028_C_T | chr1:1199028 | -48 | -128 | -2,048 | 2.0e-5 |
| chr1_1185728_T_G | chr1:1185728 | 48 | -640 | 1,664 | 6.6e-6 |
| chr1_1216218_C_T | chr1:1216218 | -32 | -160 | -2,560 | 2.0e-5 |
| chr1_1180642_C_T | chr1:1180642 | 20 | -436 | -3,216 | 2.6e-5 |
| chr1_1229798_C_G | chr1:1229798 | 0 | 176 | 3,456 | — |
| chr1_1229788_C_G | chr1:1229788 | 0 | 64 | 2,688 | — |
| chr1_1199007_G_A | chr1:1199007 | 0 | 160 | 2,112 | 3.3e-5 |
| chr1_1229756_C_T | chr1:1229756 | 0 | 160 | 1,920 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.